RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 DUX3Q96PT4 197 aa13.4□□□□□ -0.26
CPSF4-209ENST00000465132 TGOLN2O43493 480 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 CCNKO75909 580 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 LYL1P12980 280 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 GPR183P32249 361 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 DEFA5Q01523 94 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 RAB31Q13636 194 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 TMEM252Q8N6L7 170 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 OR1S2Q8NGQ3 325 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 TMEM170AQ8WVE7 144 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 CCDC140Q96MF4 163 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 MBD2Q9UBB5 411 aa13.39□□□□□ -0.27
CPSF4-209ENST00000465132 IGHV3-21A0A0B4J1V1 117 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 FAM24AA6NFZ4 105 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 OR2T8A6NH00 312 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 CFDP00746 253 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-209ENST00000465132 RPL12P30050 165 aaKnown RBP13.38□□□□□ -0.27
CPSF4-209ENST00000465132 RND2P52198 227 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 AKR1C1Q04828 323 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 SLC38A11Q08AI6 406 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 FHL3Q13643 280 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 AKAP14Q86UN6 197 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-209ENST00000465132 ACY3Q96HD9 319 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 FNDC4Q9H6D8 234 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-209ENST00000465132 NPVFQ9HCQ7 196 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 OR5AC2Q9NZP5 309 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 PEMTQ9UBM1 199 aa13.38□□□□□ -0.27
CPSF4-209ENST00000465132 hCG_2014768A0A024R1R8 64 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 SMCO3A2RU48 225 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 ZFP92A6NM28 416 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 IGHV3-23P01764 117 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 NHLRC4P0CG21 123 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-209ENST00000465132 OR10J1P30954 320 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 S100A7P31151 101 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 GAMTQ14353 236 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 RNF126Q9BV68 326 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 ELOVL1Q9BW60 279 aa13.37□□□□□ -0.27
CPSF4-209ENST00000465132 IGHV4OR15-8A0A075B7B6 117 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 A0A087WW49 117 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 H0YIZ8 118 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 NDUFA4O00483 81 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 DFFBO76075 338 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 CST7O76096 145 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 YPEL3P61236 119 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-209ENST00000465132 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 ZNF546Q86UE3 836 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 Q8WTZ3 238 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 NPIPB3Q92617 1050 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 UQCC1Q9NVA1 299 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 PFDN2Q9UHV9 154 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 S4R3C0 116 aa13.36□□□□□ -0.27
CPSF4-209ENST00000465132 PRSS46E5RG02 174 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 BMPR1BO00238 502 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 MPDU1O75352 247 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 CTSGP08311 255 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.27
CPSF4-209ENST00000465132 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 S100A7AQ86SG5 101 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 TMEM217Q8N7C4 229 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 GINS3Q9BRX5 216 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 TMEM147Q9BVK8 224 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 UFC1Q9Y3C8 167 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 LSM4Q9Y4Z0 139 aaKnown RBP13.35□□□□□ -0.27
CPSF4-209ENST00000465132 U3KQK5 164 aa13.35□□□□□ -0.27
CPSF4-209ENST00000465132 FXYD6-FXYD2A0A087WZ82 144 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 IGSF23A1L1A6 192 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 PMS2P5A8MQ11 134 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 PPP5D1E7EU14 171 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 LGALS9O00182 355 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 IGHV3-48P01763 117 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 BMI1P35226 326 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 AP2S1P53680 142 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-209ENST00000465132 ELLP55199 621 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-209ENST00000465132 SELENOTP62341 195 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 TCTE3Q8IZS6 198 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 TRGV9Q99603 122 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
CPSF4-209ENST00000465132 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 OVOL1O14753 267 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 OR2C1O95371 312 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 KLF5Q13887 457 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-209ENST00000465132 MLANAQ16655 118 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 C9orf66Q5T8R8 295 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 THAP8Q8NA92 274 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 OR5C1Q8NGR4 320 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 NARS2Q96I59 477 aaKnown RBP13.33□□□□□ -0.28
CPSF4-209ENST00000465132 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 PRR25Q96S07 402 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 KCNIP2Q9NS61 270 aa13.33□□□□□ -0.28
CPSF4-209ENST00000465132 ZNF320A2RRD8 509 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 YIF1AO95070 293 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 IFNA5P01569 189 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 TRBV12-3P01733 135 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 IGLC1P0CG04 106 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms