RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SPANXN5Q5MJ07 72 aa10.39□□□□□ -0.75
LIMD1-203ENST00000465039 ADAMTSL5Q6ZMM2 481 aa10.39□□□□□ -0.75
LIMD1-203ENST00000465039 ZNF414Q96IQ9 312 aa10.39□□□□□ -0.75
LIMD1-203ENST00000465039 GGACTQ9BVM4 153 aa10.39□□□□□ -0.75
LIMD1-203ENST00000465039 PSENENQ9NZ42 101 aa10.39□□□□□ -0.75
LIMD1-203ENST00000465039 MRPL36Q9P0J6 103 aaKnown RBP10.39□□□□□ -0.75
LIMD1-203ENST00000465039 K7EPK0 472 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 SSNA1O43805 119 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 SCGB1D2O95969 90 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 NUP62P37198 522 aaPredicted RBP10.38□□□□□ -0.75
LIMD1-203ENST00000465039 PAX9P55771 341 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 GAMTQ14353 236 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 DEFB114Q30KQ6 69 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 C11orf87Q6NUJ2 197 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 THAP8Q8NA92 274 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 NPIPB3Q92617 1050 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
LIMD1-203ENST00000465039 L7N2F9 121 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 YIF1AO95070 293 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 TOMM40O96008 361 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 PET100P0DJ07 73 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 GP9P14770 177 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 SPNP16150 400 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 VAMP2P63027 116 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 DLK1P80370 383 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 TM4SF20Q53R12 229 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 Q8WTZ3 238 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 ACY3Q96HD9 319 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 TRGV9Q99603 122 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 C20orf24Q9BUV8 137 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 TMEM231Q9H6L2 316 aa10.37□□□□□ -0.75
LIMD1-203ENST00000465039 PUS1Q9Y606 427 aaKnown RBP eCLIP10.37□□□□□ -0.75
LIMD1-203ENST00000465039 TRAV14DV4A0A0A6YYC5 116 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 IGHV3-35A0A0C4DH35 117 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 IGHV7-4-1A0A0J9YVY3 117 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 A0A1W2PS18 150 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 H3BP45 60 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 GOSR2O14653 212 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 OXA1LQ15070 435 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 MLANAQ16655 118 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
LIMD1-203ENST00000465039 LAMTOR1Q6IAA8 161 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 ACOT7LQ6ZUV0 252 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 TMEM144Q7Z5S9 345 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 OR10P1Q8NGE3 313 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 NARS2Q96I59 477 aaKnown RBP10.36□□□□□ -0.75
LIMD1-203ENST00000465039 METTL26Q96S19 204 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
LIMD1-203ENST00000465039 LYRM2Q9NU23 88 aaPredicted RBP10.36□□□□□ -0.75
LIMD1-203ENST00000465039 SMPXQ9UHP9 88 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 PFDN2Q9UHV9 154 aa10.36□□□□□ -0.75
LIMD1-203ENST00000465039 ZFP92A6NM28 416 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 TSPAN4O14817 238 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 DEDDO75618 318 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 RLN2P04090 185 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 RD3LP0DJH9 198 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 CRYBB3P26998 211 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 H2BFSP57053 126 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 TIGITQ495A1 244 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 OR8G2PQ6IF36 304 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 GTSCR1Q86UQ5 136 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 STX12Q86Y82 276 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 OR51G1Q8NGK1 321 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 VSIRQ9H7M9 311 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 MLXQ9UH92 298 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 PAIP2BQ9ULR5 123 aaKnown RBP10.35□□□□□ -0.75
LIMD1-203ENST00000465039 SLC45A2Q9UMX9 530 aa10.35□□□□□ -0.75
LIMD1-203ENST00000465039 PRKDCP78527 4128 aaKnown RBP10.34□□□□□ -0.75
LIMD1-203ENST00000465039 WI2-2373I1.2A0A1W2PRP0 233 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 K7EIL1 84 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 NPPCP23582 126 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 S100A7P31151 101 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 S100A10P60903 97 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 SELENOTP62341 195 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 HBG1P69891 147 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 HBG2P69892 147 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 RAB32Q13637 225 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 BTNL8Q6UX41 500 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 FAM110AQ9BQ89 295 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 MGAT4CQ9UBM8 478 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 LSM5Q9Y4Y9 91 aaKnown RBP10.34□□□□□ -0.75
LIMD1-203ENST00000465039 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
LIMD1-203ENST00000465039 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
LIMD1-203ENST00000465039 IGKV1D-37A0A075B6S9 117 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 TRAV2A0A0B4J234 112 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 A8MZ25 164 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 E5RGE8 158 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 CHEK1O14757 476 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 METTL15P1P0C7V9 234 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 SULT1A1P50225 295 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 CAV2P51636 162 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 AKR1C1Q04828 323 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms