RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 NECAP1Q8NC96 275 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
COL5A1-205ENST00000464187 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 ACY3Q96HD9 319 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
COL5A1-205ENST00000464187 PDZD2O15018 2839 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 PRRC2AP48634 2157 aaKnown RBP11.57□□□□□ -0.56
COL5A1-205ENST00000464187 OOSP1A8MZH6 123 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 NPFFO15130 113 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 TGFAP01135 160 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 CRYGBP07316 175 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 OR5G3P0C626 314 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 GALR1P47211 349 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 MEOX2P50222 304 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 TEX45Q8NA69 505 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 CFHR4Q92496 578 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 CCDC168Q8NDH2 2452 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 IGHV3OR16-10A0A075B7F0 116 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 MT-CO2P00403 227 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 REG1AP05451 166 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-205ENST00000464187 OR5T1Q8NG75 326 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 ZNF503Q96F45 646 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 PYGO2Q9BRQ0 406 aa11.56□□□□□ -0.56
COL5A1-205ENST00000464187 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL5A1-205ENST00000464187 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 IGLC7A0M8Q6 106 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 PGPEP1LA6NFU8 196 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 PHOX2AO14813 284 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 TGOLN2O43493 480 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL5A1-205ENST00000464187 PRSS8Q16651 343 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 OR5B12Q96R08 314 aa11.55□□□□□ -0.56
COL5A1-205ENST00000464187 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
COL5A1-205ENST00000464187 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
COL5A1-205ENST00000464187 CREBBPQ92793 2442 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 AVPP01185 164 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 S100A8P05109 93 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 CD24P25063 80 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 PSG5Q15238 335 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 BRD3OSQ6XYD6 125 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 MMD2Q8IY49 270 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 FRZBQ92765 325 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 C11orf52Q96A22 123 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 FOXC2Q99958 501 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 C19orf24Q9BVV8 132 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
COL5A1-205ENST00000464187 AREGP15514 252 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 HOXA5P20719 270 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 S100PP25815 95 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 RPL27AP46776 148 aaKnown RBP11.53□□□□□ -0.56
COL5A1-205ENST00000464187 NDUFA6P56556 154 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 TNXAQ16473 311 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 RNF5Q99942 180 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 TMEM167BQ9NRX6 74 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 MRPL36Q9P0J6 103 aaKnown RBP11.53□□□□□ -0.56
COL5A1-205ENST00000464187 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 ZFHX3Q15911 3703 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 ZANQ9Y493 2812 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 IGKV1D-37A0A075B6S9 117 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
COL5A1-205ENST00000464187 J3QLI3 93 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 OR7C2O60412 319 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 MOSP00540 346 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 SMIM6P0DI80 62 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 CD99P14209 185 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 SRP14P37108 136 aaKnown RBP11.52□□□□□ -0.57
COL5A1-205ENST00000464187 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-205ENST00000464187 MFAP2P55001 183 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 TAS2R45P59539 299 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 HES1Q14469 280 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 KLF17Q5JT82 389 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-205ENST00000464187 PQLC2Q6ZP29 291 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 C19orf35Q6ZS72 473 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms