RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 FAM168AQ92567 244 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 FAM173AQ9BQD7 235 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 NPCDR1Q9BY65 106 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 TTTY13Q9BZ97 58 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 FAM234AQ9H0X4 552 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 CCL28Q9NRJ3 127 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 SIGLEC8Q9NYZ4 499 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 PTRH2Q9Y3E5 179 aaKnown RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 CACNA1DQ01668 2161 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 MDC1Q14676 2089 aaKnown RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 ARHGEF17Q96PE2 2063 aaPredicted RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 GVINP1Q7Z2Y8 2422 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 IGLV1-36A0A0B4J1U3 117 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1-9A0A0C4DH69 117 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 C9JAW5 83 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 K7ESM1 405 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 RHODO00212 210 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 CRLF1O75462 422 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 SNRNP200O75643 2136 aaKnown RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 MOSP00540 346 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 CT62P0C5K7 136 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PVRP15151 417 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PSMB2P49721 201 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 DUX4L9Q6RFH8 374 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TEPPQ6URK8 271 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 Q6ZQT7 251 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 Q6ZR03 302 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 OR9G4Q8NGQ1 327 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 CFHR4Q92496 578 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ABHD14BQ96IU4 210 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 DNAJC30Q96LL9 226 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 SGK494Q96LW2 274 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TRIB1Q96RU8 372 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ASCL2Q99929 193 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 CHCHD5Q9BSY4 110 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PRRG4Q9BZD6 226 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF442Q9H7R0 627 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 HEYLQ9NQ87 328 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF355PQ9NSJ1 428 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM74BQ9NUR3 256 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 HIGD1AQ9Y241 93 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ANKRD17O75179 2603 aaKnown RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1D-13A0A0B4J2D9 117 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1-8A0A0C4DH67 115 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IZUMO1RA6ND01 250 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 H0Y8X5 98 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PRRG2O14669 202 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 RRHO14718 337 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1-13P0DP09 117 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ACP1P24666 158 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PEBP1P30086 187 aaKnown RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 OPRK1P41145 380 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IL11RAQ14626 422 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PIGYQ3MUY2 71 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 KLF17Q5JT82 389 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 FNDC7Q5VTL7 733 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 SIGLEC15Q6ZMC9 328 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 DCAF4L2Q8NA75 395 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 OR4C3Q8NH37 302 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 OR13C6PQ8NH95 151 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 HOXB13Q92826 284 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 C1orf159Q96HA4 380 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 VSTM2LQ96N03 204 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 SLC25A33Q9BSK2 321 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM126AQ9H061 195 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 FBXL15Q9H469 300 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 IL36RNQ9UBH0 155 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 FZR1Q9UM11 496 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 KLK5Q9Y337 293 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 MED12LQ86YW9 2145 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TRANK1O15050 2925 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TRAV8-1A0A0A6YYK1 113 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TRAV8-2A0A0B4J237 113 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 LOC107984156A0A0G2JMH3 177 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 C17orf51A8MQB3 221 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 OOSP1A8MZH6 123 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 E9PLD3 99 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 LTAP01374 205 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 CD70P32970 193 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 FXYD7P58549 80 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 RPL27P61353 136 aaKnown RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 KLF5Q13887 457 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 HES1Q14469 280 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF658BQ4V348 819 aaPredicted RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM78Q5T7P6 136 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 LINC01545Q5VT33 79 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 CBLN3Q6UW01 205 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 RBPMS2Q6ZRY4 209 aaKnown RBP2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PPP1R27Q86WC6 154 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 ARL17AQ8IVW1 177 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM147Q9BVK8 224 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 PRO0461Q9UI25 63 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 TIMM9Q9Y5J7 89 aa2.94□□□□□ -1.94
COL8A1-205ENST00000463753 NOTCH4Q99466 2003 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ANAPC1Q9H1A4 1944 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1D-43A0A0B4J1Z2 117 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 A0A1W2PQU0 124 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF840PA6NDX5 716 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms