RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NPIPB3Q92617 1050 aa13.28□□□□□ -0.28
VPS52-214ENST00000463486 CIB3Q96Q77 187 aaPredicted RBP13.28□□□□□ -0.28
VPS52-214ENST00000463486 TRAV25A0A0B4J276 109 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 A8MZ25 164 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 YIF1AO95070 293 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.29
VPS52-214ENST00000463486 IFNA4P05014 189 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 IL15RAQ13261 267 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 GAMTQ14353 236 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 ETFRF1Q6IPR1 90 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 LILRB2Q8N423 598 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 ENKURQ8TC29 256 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 MARVELD1Q9BSK0 173 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 C19orf73Q9NVV2 129 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 NBEAL2Q6ZNJ1 2754 aa13.27□□□□□ -0.29
VPS52-214ENST00000463486 IGKV1D-37A0A075B6S9 117 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 TRAV30A0A087WSZ9 112 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 TRAV14DV4A0A0A6YYC5 116 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 CHEK1O14757 476 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 APOHP02749 345 aaPredicted RBP13.26□□□□□ -0.29
VPS52-214ENST00000463486 CD7P09564 240 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 YPEL3P61236 119 aaPredicted RBP13.26□□□□□ -0.29
VPS52-214ENST00000463486 ACY3Q96HD9 319 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 SMIM8Q96KF7 97 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 RHPN1-AS1Q9BWJ2 59 aa13.26□□□□□ -0.29
VPS52-214ENST00000463486 RCL1Q9Y2P8 373 aaKnown RBP13.26□□□□□ -0.29
VPS52-214ENST00000463486 IGHV3-49A0A0A0MS15 119 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 PMS2P5A8MQ11 134 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
VPS52-214ENST00000463486 IGHV4-30-4P0DP06 118 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 OR10J1P30954 320 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 FAM90A2PQ658T7 463 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 RNF2Q99496 336 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 VSIRQ9H7M9 311 aa13.25□□□□□ -0.29
VPS52-214ENST00000463486 IGKV1OR2-108A0A075B7D4 117 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 H3BP45 60 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 TSPAN4O14817 238 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 FRMD6-AS1P0C7T7 363 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 RAB11AP62491 216 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 GUCA2BQ16661 112 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 SPANXN5Q5MJ07 72 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 NEURL2Q9BR09 285 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 C11orf1Q9H5F2 150 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 GSKIPQ9P0R6 139 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 U3KQE9 123 aa13.24□□□□□ -0.29
VPS52-214ENST00000463486 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 SNRPGP15A8MWD9 76 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 SSSCA1O60232 199 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 CRYBB3P26998 211 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 DEFA1P59665 94 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 DEFA3P59666 94 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 SBSPONQ8IVN8 264 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 ST8SIA2Q92186 375 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 PSENENQ9NZ42 101 aa13.23□□□□□ -0.29
VPS52-214ENST00000463486 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
VPS52-214ENST00000463486 C7orf66A4D0T2 115 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 TAS2R30P59541 319 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 CD81P60033 236 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 RPP30P78346 268 aaKnown RBP13.22□□□□□ -0.29
VPS52-214ENST00000463486 LINC00322Q6ZN03 302 aaPredicted RBP13.22□□□□□ -0.29
VPS52-214ENST00000463486 RBPMS2Q6ZRY4 209 aaKnown RBP13.22□□□□□ -0.29
VPS52-214ENST00000463486 GTSCR1Q86UQ5 136 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 C2orf50Q96LR7 162 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 RAB40CQ96S21 281 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 GINS3Q9BRX5 216 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 WFDC10AQ9H1F0 79 aa13.22□□□□□ -0.29
VPS52-214ENST00000463486 PRAF2O60831 178 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 CCNKO75909 580 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 TOMM40O96008 361 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 PSG1P11464 419 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 ZNF90Q03938 601 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.29
VPS52-214ENST00000463486 Q8WTZ3 238 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 ASCL2Q99929 193 aa13.21□□□□□ -0.29
VPS52-214ENST00000463486 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
VPS52-214ENST00000463486 PAIP2BQ9ULR5 123 aaKnown RBP13.21□□□□□ -0.29
VPS52-214ENST00000463486 FAM25EA8MYX2 175 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 K7EPK0 472 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 TSC22D2O75157 780 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 RD3LP0DJH9 198 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 NPPCP23582 126 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 DEFB125Q8N687 156 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 SLC35E1Q96K37 410 aa13.2□□□□□ -0.3
VPS52-214ENST00000463486 IGHV3-66A0A0C4DH42 116 aa13.19□□□□□ -0.3
VPS52-214ENST00000463486 C5orf51A6NDU8 294 aa13.19□□□□□ -0.3
VPS52-214ENST00000463486 DFFBO76075 338 aa13.19□□□□□ -0.3
VPS52-214ENST00000463486 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
VPS52-214ENST00000463486 ACOT7LQ6ZUV0 252 aa13.19□□□□□ -0.3
VPS52-214ENST00000463486 TRGV9Q99603 122 aa13.19□□□□□ -0.3
VPS52-214ENST00000463486 GPN1Q9HCN4 374 aaPredicted RBP13.19□□□□□ -0.3
VPS52-214ENST00000463486 DNAH7Q8WXX0 4024 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 OR11H12B2RN74 326 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms