RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 OR13C6PQ8NH95 151 aa10.54□□□□□ -0.72
NUP58-206ENST00000463407 SMIM12Q96EX1 92 aa10.54□□□□□ -0.72
NUP58-206ENST00000463407 TMEM70Q9BUB7 260 aa10.54□□□□□ -0.72
NUP58-206ENST00000463407 DTX1Q86Y01 620 aa10.54□□□□□ -0.72
NUP58-206ENST00000463407 KIR3DL3Q8N743 410 aa10.54□□□□□ -0.72
NUP58-206ENST00000463407 IGKV1D-17A0A075B6S4 117 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 SRP19P09132 144 aaKnown RBP10.53□□□□□ -0.72
NUP58-206ENST00000463407 ZNF256Q9Y2P7 627 aaPredicted RBP10.53□□□□□ -0.72
NUP58-206ENST00000463407 TAS2R60P59551 318 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 HGFACQ04756 655 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 ARTNQ5T4W7 220 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 COX6CP09669 75 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 RNF5Q99942 180 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 TRAV21A0A0B4J279 112 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 MALP21145 153 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 LBHQ53QV2 105 aaPredicted RBP10.53□□□□□ -0.72
NUP58-206ENST00000463407 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 HIST1H4GQ99525 98 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 ASCL2Q99929 193 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 PYYP10082 97 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 GATA3P23771 443 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
NUP58-206ENST00000463407 H0YJW9 148 aa10.52□□□□□ -0.72
NUP58-206ENST00000463407 PRB4P10163 310 aaPredicted RBP10.52□□□□□ -0.72
NUP58-206ENST00000463407 C5orf64Q2M2E5 130 aa10.52□□□□□ -0.72
NUP58-206ENST00000463407 GCSAMLQ5JQS6 135 aa10.52□□□□□ -0.72
NUP58-206ENST00000463407 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.72
NUP58-206ENST00000463407 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
NUP58-206ENST00000463407 FOXA3P55318 350 aaPredicted RBP10.52□□□□□ -0.73
NUP58-206ENST00000463407 ZNF415Q09FC8 603 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 KIAA1671Q9BY89 1806 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 TRBV7-1A0A0A6YYK4 115 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 RPL15P61313 204 aaKnown RBP10.52□□□□□ -0.73
NUP58-206ENST00000463407 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 OVOL1O14753 267 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 HEATR5BQ9P2D3 2071 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 A0A1B0GUT8 65 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
NUP58-206ENST00000463407 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 LY6G6FQ5SQ64 297 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 MRAP2Q96G30 205 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 VGLL1Q99990 258 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 TMEM160Q9NX00 188 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 SDK2Q58EX2 2172 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 C18orf15Q96N68 181 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 NLRC5Q86WI3 1866 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 STAG3L2P0CL84 134 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
NUP58-206ENST00000463407 PLXNA4Q9HCM2 1894 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 SCGB3A1Q96QR1 104 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 CRPP02741 224 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 Q6P435 159 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 TMEM136Q6ZRR5 245 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
NUP58-206ENST00000463407 ICE1Q9Y2F5 2266 aa10.51□□□□□ -0.73
NUP58-206ENST00000463407 MRPS16Q9Y3D3 137 aaKnown RBP10.51□□□□□ -0.73
NUP58-206ENST00000463407 NDPQ00604 133 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 DTX2Q86UW9 622 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 KLF17Q5JT82 389 aaPredicted RBP10.5□□□□□ -0.73
NUP58-206ENST00000463407 FOXL2NBQ6ZUU3 175 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 CBY1Q9Y3M2 126 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 RNF144BQ7Z419 303 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 WFDC1Q9HC57 220 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 EPDR1Q9UM22 224 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 APOHP02749 345 aaPredicted RBP10.5□□□□□ -0.73
NUP58-206ENST00000463407 PRB1P04280 392 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
NUP58-206ENST00000463407 ID3Q02535 119 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
NUP58-206ENST00000463407 FXYD7P58549 80 aa10.5□□□□□ -0.73
NUP58-206ENST00000463407 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 IZUMO1RA6ND01 250 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 H3BRM9 83 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 LDLRAD4O15165 306 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 ATOH7Q8N100 152 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 IMMP2LQ96T52 175 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 GPR61Q9BZJ8 451 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 FAM223BA6NKX1 122 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 FAM223AQ8IWN6 122 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 TNFSF13O75888 250 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 PRTN3P24158 256 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 CR1LQ2VPA4 569 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 PSG8Q9UQ74 426 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 SOX21Q9Y651 276 aaPredicted RBP10.49□□□□□ -0.73
NUP58-206ENST00000463407 EFNB3Q15768 340 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 Q6AWC8 147 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 COQ2Q96H96 371 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 CD5P06127 495 aa10.49□□□□□ -0.73
NUP58-206ENST00000463407 RNASE7Q9H1E1 156 aaKnown RBP10.49□□□□□ -0.73
NUP58-206ENST00000463407 TRAV3A0A0B4J244 114 aa10.48□□□□□ -0.73
NUP58-206ENST00000463407 A0A1B0GW15 77 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms