RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ZNF680Q8NEM1 530 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 NPBQ8NG41 125 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 OR1L8Q8NGR8 309 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 OR4C12Q96R67 309 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 SMIM3Q9BZL3 60 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 FBXL15Q9H469 300 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 CYTL1Q9NRR1 136 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 PAIP2BQ9ULR5 123 aaKnown RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 TLN2Q9Y4G6 2542 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 ABCA2Q9BZC7 2435 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 WNK2Q9Y3S1 2297 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 CR1P17927 2039 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 FN1P02751 2386 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 BORCS7-ASMTA0A0B4J1R7 106 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 A0A0U1RQK1 487 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 A0A1W2PN81 502 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 NCBP2LA6PVI3 153 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 NDUFA3O95167 84 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 IFNA10P01566 189 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 IFNA7P01567 189 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 TPT1P13693 172 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 TMEM11P17152 192 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 MAS1LP35410 378 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 CHRNA7P36544 502 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 CAMPP49913 170 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 EIF5AP63241 154 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 HBG1P69891 147 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 HBG2P69892 147 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 EXOSC2Q13868 293 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 CLINT1Q14677 625 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 TNXAQ16473 311 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 RPL7L1Q6DKI1 246 aaKnown RBP5.76□□□□□ -1.49
UBE4B-204ENST00000462658 OR8G2PQ6IF36 304 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 TMEM14EPQ6UXP3 125 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 C18orf65Q6ZTR6 163 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 ZNF767PQ75MW2 155 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 PPP1R27Q86WC6 154 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 BAP18Q8IXM2 172 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 Q8N6K4 173 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 OR1S2Q8NGQ3 325 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 OR5C1Q8NGR4 320 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 PLEKHA3Q9HB20 300 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 WFDC1Q9HC57 220 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 NDUFA4L2Q9NRX3 87 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 CMYA5Q8N3K9 4069 aa5.76□□□□□ -1.49
UBE4B-204ENST00000462658 CSPG4Q6UVK1 2322 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 ANK2Q01484 3957 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 C15orf62A8K5M9 175 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 E7EUB6 86 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 FCN1O00602 326 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 OR8U8P0C7N1 319 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 RPL27AP46776 148 aaKnown RBP5.75□□□□□ -1.49
UBE4B-204ENST00000462658 BPIFB3P59826 476 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 RAB11AP62491 216 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 GNB1P62873 340 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 ERHP84090 104 aaKnown RBP5.75□□□□□ -1.49
UBE4B-204ENST00000462658 SLC38A11Q08AI6 406 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 ARL16Q0P5N6 197 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 C5orf64Q2M2E5 130 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 C10orf55Q5SWW7 151 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 ALKAL2Q6UX46 152 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 IQCF2Q8IXL9 164 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 CIARTQ8N365 385 aaPredicted RBP5.75□□□□□ -1.49
UBE4B-204ENST00000462658 OR10P1Q8NGE3 313 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 OR10W1Q8NGF6 305 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 STOML3Q8TAV4 291 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 ATP5SQ99766 215 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 UBQLN2Q9UHD9 624 aa5.75□□□□□ -1.49
UBE4B-204ENST00000462658 SOX21Q9Y651 276 aaPredicted RBP5.75□□□□□ -1.49
UBE4B-204ENST00000462658 NSD1Q96L73 2696 aaPredicted RBP5.75□□□□□ -1.49
UBE4B-204ENST00000462658 A0A1B0GW64 132 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 IFITM10A6NMD0 228 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 PMS2P5A8MQ11 134 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 INS-IGF2F8WCM5 200 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 BUB3O43684 328 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 DFFBO76075 338 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 CNIH1O95406 144 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 CA2P00918 260 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 IFNA5P01569 189 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 IFNA4P05014 189 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 FBP1P09467 338 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 NPY1RP25929 384 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 SNCAP37840 140 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 HTR2BP41595 481 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 ATP5IP56385 69 aaPredicted RBP5.74□□□□□ -1.49
UBE4B-204ENST00000462658 ZNF266Q14584 549 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 ATP6V1FQ16864 119 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 SPNS3Q6ZMD2 512 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 STPG2Q8N412 459 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 UBAC2Q8NBM4 344 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 SLC24A4Q8NFF2 622 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 NANPQ8TBE9 248 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 PIFOQ8TCI5 191 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 PINX1Q96BK5 328 aaKnown RBP5.74□□□□□ -1.49
UBE4B-204ENST00000462658 PHYHIPLQ96FC7 376 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 SSX3Q99909 188 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 ARV1Q9H2C2 271 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 C2CD3Q4AC94 2353 aa5.74□□□□□ -1.49
UBE4B-204ENST00000462658 NAV3Q8IVL0 2385 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms