RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ZFHX3Q15911 3703 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CCDC168Q8NDH2 2452 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 IGHV3-72A0A0B4J1Y9 119 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 IGHV1-3A0A0C4DH29 117 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 A0A0G2JRQ6 117 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 TMEM213A2RRL7 107 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 MPTX1A8MV57 137 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 SNRPGP15A8MWD9 76 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 H0Y980 276 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 FCN1O00602 326 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CREBL2O60519 120 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 ADAP1O75689 374 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 S1PR2O95136 353 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 BRI3O95415 125 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CT45A6P0DMU7 189 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CT45A5P0DMU8 189 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CT45A7P0DMV0 189 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CXCL3P19876 107 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 HTR1DP28221 377 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 LEPP41159 167 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 THBS3P49746 956 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 UBE2E1P51965 193 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF816Q0VGE8 651 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CATR1Q13166 79 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 FCN2Q15485 313 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 TNXAQ16473 311 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 ECSCRQ19T08 205 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 C5orf47Q569G3 176 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 TPTE2P1Q5T6R2 138 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 BRD3OSQ6XYD6 125 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 LINC00336Q6ZUF6 198 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CMTM1Q8IZ96 169 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 C12orf45Q8N5I9 185 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 SLC35G3Q8N808 338 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 OR1S2Q8NGQ3 325 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 C11orf52Q96A22 123 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 HSD17B10Q99714 261 aaKnown RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 TMEM222Q9H0R3 208 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 OR51J1Q9H342 316 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 RBKSQ9H477 322 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 SAV1Q9H4B6 383 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 TBL2Q9Y4P3 447 aaKnown RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 AMMECR1Q9Y4X0 333 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 SOX21Q9Y651 276 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-205ENST00000462254 NAV3Q8IVL0 2385 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 CSMD1Q96PZ7 3565 aa3.62□□□□□ -1.83
CSMD3-205ENST00000462254 A0A0B4J2A0 478 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 IGHV1-69DA0A0B4J2H0 117 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 LEUTXA8MZ59 168 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 H0YJW9 148 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 J3QLI3 93 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 NPFFO15130 113 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SSNA1O43805 119 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 CD5LO43866 347 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SIX6O95475 246 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 CDS2O95674 445 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 CRYZL1O95825 349 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 IGHV1-69P01742 117 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 IGKV1-16P04430 117 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 OR9G9P0C7N8 305 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SULT1A3P0DMM9 295 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SULT1A4P0DMN0 295 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 IL3RAP26951 378 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 S100GP29377 79 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 LPAR6P43657 344 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 TFPI2P48307 235 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 CD300CQ08708 224 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 IZUMO4Q1ZYL8 232 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 MINOS1Q5TGZ0 78 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 CYB5R2Q6BCY4 276 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 LYZL2Q7Z4W2 148 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SPAG16Q8N0X2 631 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 TCTEX1D1Q8N7M0 179 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 NECAP1Q8NC96 275 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 RBPMSQ93062 196 aaKnown RBP3.61□□□□□ -1.83
CSMD3-205ENST00000462254 RPEQ96AT9 228 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SEC22AQ96IW7 307 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 ADTRPQ96IZ2 230 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 C18orf12Q96KH6 178 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 TMEM56Q96MV1 263 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 PHB2Q99623 299 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SMR3AQ99954 134 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 MED28Q9H204 178 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 DPM3Q9P2X0 92 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 SHPKQ9UHJ6 478 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 PRELID3BQ9Y3B1 194 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 HILPDAQ9Y5L2 63 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 MINOS1-NBL1R4GNA1 71 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 URGCP-MRPS24S4R325 110 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 TMEM56-RWDD3S4R434 201 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 OTOGQ6ZRI0 2925 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 ACANP16112 2415 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 CREBBPQ92793 2442 aa3.61□□□□□ -1.83
CSMD3-205ENST00000462254 MDFIC2A0A1B0GVS7 189 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 DUXBA0A1W2PPF3 345 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 G3V3Q6 166 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 H7C2Y5 167 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 RBFOX2O43251 390 aaKnown RBP eCLIP3.6□□□□□ -1.83
CSMD3-205ENST00000462254 SNAI2O43623 268 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 VENTXO95231 258 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms