RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ASCL2Q99929 193 aa7.98□□□□□ -1.13
TRAPPC12-213ENST00000461577 NEURL2Q9BR09 285 aa7.98□□□□□ -1.13
TRAPPC12-213ENST00000461577 SEC22CQ9BRL7 303 aa7.98□□□□□ -1.13
TRAPPC12-213ENST00000461577 TUBA4BQ9H853 241 aa7.98□□□□□ -1.13
TRAPPC12-213ENST00000461577 SMPXQ9UHP9 88 aa7.98□□□□□ -1.13
TRAPPC12-213ENST00000461577 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 SCGB1D2O95969 90 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 NHLRC4P0CG21 123 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 IGHV4-30-4P0DP06 118 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 OR10J1P30954 320 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 DEFA1P59665 94 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 DEFA3P59666 94 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 ID3Q02535 119 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 SPANXN5Q5MJ07 72 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 C12orf45Q8N5I9 185 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 ZBTB8BQ8NAP8 495 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 OR4D5Q8NGN0 318 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 Q8WTZ3 238 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 NPIPB3Q92617 1050 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 ZNF414Q96IQ9 312 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 RHPN1-AS1Q9BWJ2 59 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 GSKIPQ9P0R6 139 aa7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 STRAPQ9Y3F4 350 aaKnown RBP7.97□□□□□ -1.13
TRAPPC12-213ENST00000461577 C5orf51A6NDU8 294 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 FAM25EA8MYX2 175 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 CCSO14618 274 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 CHEK1O14757 476 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 CD7P09564 240 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 FRMD6-AS1P0C7T7 363 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 IGLC1P0CG04 106 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 IFITM3Q01628 133 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 NARS2Q96I59 477 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 METTL26Q96S19 204 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 TMEM231Q9H6L2 316 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 PSENENQ9NZ42 101 aa7.96□□□□□ -1.14
TRAPPC12-213ENST00000461577 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 A8MZ25 164 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 OR11H12B2RN74 326 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 H3BP45 60 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 TSPAN4O14817 238 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 SSSCA1O60232 199 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 IL5P05113 134 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 NPPCP23582 126 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 YPEL3P61236 119 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 RNF2Q99496 336 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 SPAG8Q99932 426 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 GPN1Q9HCN4 374 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 C19orf73Q9NVV2 129 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 DNAH9Q9NYC9 4486 aa7.95□□□□□ -1.14
TRAPPC12-213ENST00000461577 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 A0A1W2PS18 150 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 OR4C46A6NHA9 309 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 ZFP92A6NM28 416 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 INMT-MINDY4F8WBC2 141 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 TOMM40O96008 361 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 CD5P06127 495 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 RD3LP0DJH9 198 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 PAFAH1B2P68402 229 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 GAMTQ14353 236 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 GSG1LQ6UXU4 331 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 TCF24Q7RTU0 167 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 NRARPQ7Z6K4 114 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 SBSPONQ8IVN8 264 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 DEFB125Q8N687 156 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 RAB40CQ96S21 281 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 SRD5A3Q9H8P0 318 aa7.94□□□□□ -1.14
TRAPPC12-213ENST00000461577 TGP01266 2768 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 IGKV3-7A0A075B6H7 116 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 L7N2F9 121 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 PRAF2O60831 178 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 APOHP02749 345 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 IL4P05112 153 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 FABP1P07148 127 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 HNRNPCP07910 306 aaKnown RBP eCLIP7.93□□□□□ -1.142e-6■■■□□ 15.9
TRAPPC12-213ENST00000461577 CRYBB3P26998 211 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 TFPI2P48307 235 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 RPL11P62913 178 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 VAMP2P63027 116 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 C2orf50Q96LR7 162 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 WFDC10AQ9H1F0 79 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 VSIRQ9H7M9 311 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 ZMAT4Q9H898 229 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 RABAC1Q9UI14 185 aa7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 RCL1Q9Y2P8 373 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 LSM5Q9Y4Y9 91 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-213ENST00000461577 SMCO3A2RU48 225 aa7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 DNASE2O00115 360 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 MBPP02686 304 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 PSG1P11464 419 aa7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 TAS2R30P59541 319 aa7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 AKR1C1Q04828 323 aa7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 OR8G2PQ6IF36 304 aa7.92□□□□□ -1.14
TRAPPC12-213ENST00000461577 GBGT1Q8N5D6 347 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms