RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 CDX1P47902 265 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 CEBPGP53567 150 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 KLF3P57682 345 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 OR2B8PP59922 312 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SPCS3P61009 180 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 RAB11AP62491 216 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 MEF2BQ02080 365 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 FABP9Q0Z7S8 132 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 EDDM3AQ14507 147 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 TMEM249Q2WGJ8 235 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 RPL39P5Q59GN2 51 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SPINK9Q5DT21 86 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 CT45A1Q5HYN5 189 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 STUMQ69YW2 141 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 DUX4L9Q6RFH8 374 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 CYP2G1PQ6ZSU1 146 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 ZNRF1Q8ND25 227 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 OR10P1Q8NGE3 313 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 OR52E5Q8NH55 327 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 CT45A3Q8NHU0 189 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 FAM57AQ8TBR7 257 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 GATAD1Q8WUU5 269 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 PHLDA1Q8WV24 401 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 ITLN1Q8WWA0 313 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 LHX4Q969G2 390 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SDSLQ96GA7 329 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 GAFA1Q96PS6 74 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 CIB3Q96Q77 187 aaPredicted RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 OR2V2Q96R30 315 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SSX3Q99909 188 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 ZNF251Q9BRH9 671 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 NIPSNAP3BQ9BS92 247 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SFXN3Q9BWM7 321 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 NPCDR1Q9BY65 106 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SRD5A3Q9H8P0 318 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SLC25A22Q9H936 323 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 MANBALQ9NQG1 85 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SLC39A9Q9NUM3 307 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 CALYQ9NYX4 217 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 SPENQ96T58 3664 aaKnown RBP3.04□□□□□ -1.92
CFHR3-204ENST00000461558 OTOGLQ3ZCN5 2332 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 KNTC1P50748 2209 aa3.04□□□□□ -1.92
CFHR3-204ENST00000461558 FRYQ5TBA9 3013 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 YLPM1P49750 1951 aaKnown RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 MUC3AQ02505 3323 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 TRBV24-1A0A075B6N3 115 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 KBTBD11-OT1A0A1B0GTJ5 212 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 TMEM250H0YL14 139 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 CLDN34H7C241 214 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BKO60814 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 MPDU1O75352 247 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 CLN5O75503 358 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 FCN3O75636 299 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 KBTBD11O94819 623 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 IGHV1-46P01743 117 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 S100A6P06703 90 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BJP06899 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 PFN1P07737 140 aaKnown RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 SAA2P0DJI9 122 aaPredicted RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BOP23527 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 NPPCP23582 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BBP33778 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 RPS10P46783 165 aaKnown RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 TDGF1P3P51864 188 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BDP58876 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 B2MP61769 119 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BCP62807 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 RPL23P62829 140 aaKnown RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 S100A12P80511 92 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 KIAA0141Q14154 515 aaPredicted RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 POU2AF1Q16633 256 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST2H2BEQ16778 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 LTC4SQ16873 150 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 ACOT6Q3I5F7 207 aaPredicted RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 FAM201AQ5SY85 155 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 PRAMEF5Q5TYX0 476 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 TEX36Q5VZQ5 186 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 OR4A47Q6IF82 309 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 SPNS3Q6ZMD2 512 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 SLC16A13Q7RTY0 426 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 TGIF2LYQ8IUE0 185 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 OR10G9Q8NGN4 311 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 OR10G7Q8NGN6 311 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 OR13D1Q8NGV5 346 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 RNASE8Q8TDE3 154 aaKnown RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 RAB1CQ92928 201 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BHQ93079 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 LEAP2Q969E1 77 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 MGST2Q99735 147 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BNQ99877 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 HIST1H2BMQ99879 126 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 GGACTQ9BVM4 153 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 ACTR3CQ9C0K3 210 aaPredicted RBP3.03□□□□□ -1.92
CFHR3-204ENST00000461558 PARLQ9H300 379 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 DOK5Q9P104 306 aa3.03□□□□□ -1.92
CFHR3-204ENST00000461558 GNG12Q9UBI6 72 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms