RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 MITD1Q8WV92 249 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 ATP6V0BQ99437 205 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 HIPK2Q9H2X6 1198 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 GPN1Q9HCN4 374 aaPredicted RBP13.04□□□□□ -0.32
MRPL28-207ENST00000461550 IGHV3-49A0A0A0MS15 119 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 PIGBOS1A0A0B4J2F0 54 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 SNRPGP15A8MWD9 76 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 YIF1AO95070 293 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 SNCAP37840 140 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 HTR2BP41595 481 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 CCDC28AQ8IWP9 274 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 BOLA1Q9Y3E2 137 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 TMED3Q9Y3Q3 217 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 A0A1B0GU03 582 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 MPTX1A8MV57 137 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 GNG7O60262 68 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 LYL1P12980 280 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 SPCS3P61009 180 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 C12orf45Q8N5I9 185 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-207ENST00000461550 ENY2Q9NPA8 101 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 GAR1Q9NY12 217 aaKnown RBP13.03□□□□□ -0.32
MRPL28-207ENST00000461550 UBQLN2Q9UHD9 624 aa13.03□□□□□ -0.32
MRPL28-207ENST00000461550 TENM2Q9NT68 2774 aa13.02□□□□□ -0.32
MRPL28-207ENST00000461550 RYR3Q15413 4870 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 LINC00862A6NCI5 91 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 C15orf62A8K5M9 175 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 CEBPZOSA8MTT3 80 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 IFNA21P01568 189 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 RNASE2P10153 161 aaKnown RBP13.02□□□□□ -0.33
MRPL28-207ENST00000461550 RELQ04864 619 aaPredicted RBP13.02□□□□□ -0.33
MRPL28-207ENST00000461550 AARDQ4LEZ3 155 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 OR52E5Q8NH55 327 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 TXN2Q99757 166 aa13.02□□□□□ -0.33
MRPL28-207ENST00000461550 IGHV3OR16-13A0A075B7E8 117 aa13.01□□□□□ -0.33
MRPL28-207ENST00000461550 IGHV3-74A0A0B4J1X5 117 aa13.01□□□□□ -0.33
MRPL28-207ENST00000461550 K7EMT4 169 aa13.01□□□□□ -0.33
MRPL28-207ENST00000461550 CCSO14618 274 aa13.01□□□□□ -0.33
MRPL28-207ENST00000461550 PITX3O75364 302 aa13.01□□□□□ -0.33
MRPL28-207ENST00000461550 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-207ENST00000461550 SPAG8Q99932 426 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-207ENST00000461550 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
MRPL28-207ENST00000461550 INS-IGF2F8WCM5 200 aa13□□□□□ -0.33
MRPL28-207ENST00000461550 TSPAN4O14817 238 aa13□□□□□ -0.33
MRPL28-207ENST00000461550 SSNA1O43805 119 aa13□□□□□ -0.33
MRPL28-207ENST00000461550 RNF2Q99496 336 aa13□□□□□ -0.33
MRPL28-207ENST00000461550 RBKSQ9H477 322 aa13□□□□□ -0.33
MRPL28-207ENST00000461550 MRPL36Q9P0J6 103 aaKnown RBP13□□□□□ -0.33
MRPL28-207ENST00000461550 IGHV7-4-1A0A0J9YVY3 117 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 FAM25EA8MYX2 175 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 SLC25A6P12236 298 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 TNFRSF9Q07011 255 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 MLANAQ16655 118 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 LAMTOR1Q6IAA8 161 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 OR10C1Q96KK4 312 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 RHPN1-AS1Q9BWJ2 59 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 FNDC4Q9H6D8 234 aaPredicted RBP12.99□□□□□ -0.33
MRPL28-207ENST00000461550 HEYLQ9NQ87 328 aaPredicted RBP12.99□□□□□ -0.33
MRPL28-207ENST00000461550 HSPB7Q9UBY9 170 aa12.99□□□□□ -0.33
MRPL28-207ENST00000461550 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 CHEK1O14757 476 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 OPRK1P41145 380 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 NPBWR1P48145 328 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 SUB1P53999 127 aaKnown RBP eCLIP12.98□□□□□ -0.335e-8■■■■■ 37.7
MRPL28-207ENST00000461550 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 TMEM116Q8NCL8 245 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 GGTLC1Q9BX51 225 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 GSKIPQ9P0R6 139 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 CSMD3Q7Z407 3707 aa12.98□□□□□ -0.33
MRPL28-207ENST00000461550 LOC102724200A0A096LPH7 203 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-207ENST00000461550 TFPI2P48307 235 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 IAH1Q2TAA2 248 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-207ENST00000461550 TOMM20LQ6UXN7 152 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 C9orf62Q8N4C0 152 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 MED28Q9H204 178 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 PUS1Q9Y606 427 aaKnown RBP eCLIP12.97□□□□□ -0.33
MRPL28-207ENST00000461550 TRAV14DV4A0A0A6YYC5 116 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 IGHV3-66A0A0C4DH42 116 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 C5orf51A6NDU8 294 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 TMEM50AO95807 157 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 IAPPP10997 89 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 BSXQ3C1V8 233 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 CACFD1Q9UGQ2 172 aa12.97□□□□□ -0.33
MRPL28-207ENST00000461550 LOC105371267A0A1B0GV96 52 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 OR4C46A6NHA9 309 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 CORTO00230 105 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 SCGB1D2O95969 90 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 APOHP02749 345 aaPredicted RBP12.96□□□□□ -0.34
MRPL28-207ENST00000461550 FCN2Q15485 313 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 GBGT1Q8N5D6 347 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 OR4D5Q8NGN0 318 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 HSPB11Q9Y547 144 aa12.96□□□□□ -0.34
MRPL28-207ENST00000461550 GOSR2O14653 212 aa12.95□□□□□ -0.34
MRPL28-207ENST00000461550 ZNF600Q6ZNG1 722 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms