RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 RRHO14718 337 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 HLA-DRB1P01911 266 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 KIR2DS2P43631 304 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 LGALS7P47929 136 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 TMEM177Q53S58 311 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 DPPA3Q6W0C5 159 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 CYB561D1Q8N8Q1 229 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 RITA1Q96K30 269 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 CITED1Q99966 193 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 CCL28Q9NRJ3 127 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 ZNF580Q9UK33 172 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
APTX-209ENST00000460940 XKRY2A2RUG3 117 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 SH2D7A6NKC9 451 aaPredicted RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 SCGB1D2O95969 90 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 HBE1P02100 147 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 OR10J1P30954 320 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 LINC00205P59089 165 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 RANP62826 216 aaKnown RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 CATR1Q13166 79 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 TMEM182Q6ZP80 229 aaPredicted RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 CMTM1Q8IZ96 169 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 OR4S2Q8NH73 311 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 OSR1Q8TAX0 266 aaPredicted RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 WIPF2Q8TF74 440 aaPredicted RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 HARBI1Q96MB7 349 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 SH3BGRL3Q9H299 93 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 PRR13Q9NZ81 148 aa8.76□□□□□ -1.01
APTX-209ENST00000460940 C14orf166Q9Y224 244 aaKnown RBP8.76□□□□□ -1.01
APTX-209ENST00000460940 K7EP13 123 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 CNTFRP26992 372 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 S100GP29377 79 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 GNRHRP30968 328 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 UCP3P55916 312 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 PLGLAQ15195 96 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 PSG5Q15238 335 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 ZNF818PQ6ZRF7 136 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
APTX-209ENST00000460940 LSM5Q9Y4Y9 91 aaKnown RBP8.75□□□□□ -1.01
APTX-209ENST00000460940 RBFOX2O43251 390 aaKnown RBP eCLIP8.74□□□□□ -1.01
APTX-209ENST00000460940 FCGR3BO75015 233 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 SELENOTP62341 195 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 RPL30P62888 115 aaKnown RBP8.74□□□□□ -1.01
APTX-209ENST00000460940 CCL20P78556 96 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 ACOT6Q3I5F7 207 aaPredicted RBP8.74□□□□□ -1.01
APTX-209ENST00000460940 MIEN1Q9BRT3 115 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 FKBP11Q9NYL4 201 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 NAGKQ9UJ70 344 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 LOC102723971A0A1B0GUV8 181 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 IGLV2-23P01705 113 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
APTX-209ENST00000460940 IGF1P05019 195 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 ZNF266Q14584 549 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 VMA21Q3ZAQ7 101 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 MRPL41Q8IXM3 137 aaKnown RBP8.74□□□□□ -1.01
APTX-209ENST00000460940 TXN2Q99757 166 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 HSPB9Q9BQS6 159 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 FBXL15Q9H469 300 aa8.74□□□□□ -1.01
APTX-209ENST00000460940 IGHV7-81A0A0B4J1V7 117 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 TNFSF12O43508 249 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 SLC25A17O43808 307 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 CTSDP07339 412 aaPredicted RBP8.73□□□□□ -1.01
APTX-209ENST00000460940 RPL29P47914 159 aaKnown RBP8.73□□□□□ -1.01
APTX-209ENST00000460940 SLC35B1P78383 322 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 PMS2P11Q13670 270 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 FAM90A2PQ658T7 463 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 ETFRF1Q6IPR1 90 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 CENPVQ7Z7K6 275 aaPredicted RBP8.73□□□□□ -1.01
APTX-209ENST00000460940 GBGT1Q8N5D6 347 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 TCTEX1D1Q8N7M0 179 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 OR4X2Q8NGF9 303 aa8.73□□□□□ -1.01
APTX-209ENST00000460940 PSMB11A5LHX3 300 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 CRYM-AS1A6NIL9 109 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 PITX3O75364 302 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 HPRT1P00492 218 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 PI3P19957 117 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 FAM3BP58499 235 aaPredicted RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 TEX45Q8NA69 505 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 OR2G3Q8NGZ4 309 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 SGMS2Q8NHU3 365 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 VSTM2AQ8TAG5 236 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 IMMP2LQ96T52 175 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 SDF2L1Q9HCN8 221 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 DNAJC4Q9NNZ3 241 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 AURKAIP1Q9NWT8 199 aaPredicted RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 PGLYRP1O75594 196 aaPredicted RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 HRASP01112 189 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 CRYGBP07316 175 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 PFN1P07737 140 aaKnown RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 VDAC1P21796 283 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 CRIP2P52943 208 aaPredicted RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms