RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 MBD3L1Q8WWY6 194 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 TMEM106AQ96A25 262 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 TOMM6Q96B49 74 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 ROPN1LQ96C74 230 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 OPTNQ96CV9 577 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 DCUN1D1Q96GG9 259 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 PRAP1Q96NZ9 151 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 RETNLBQ9BQ08 111 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 NAA38Q9BRA0 125 aaKnown RBP0.15□□□□□ -2.39
PTPN22-203ENST00000460620 C9orf16Q9BUW7 83 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 ENY2Q9NPA8 101 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 C8orf4Q9NR00 106 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 PRTFDC1Q9NRG1 225 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 OSTCQ9NRP0 149 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 SLC39A9Q9NUM3 307 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 MED29Q9NX70 200 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 GLTPQ9NZD2 209 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 OPTCQ9UBM4 332 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 VPS29Q9UBQ0 182 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 SS18L2Q9UHA2 77 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 EPDR1Q9UM22 224 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 UTP11Q9Y3A2 253 aaKnown RBP0.15□□□□□ -2.39
PTPN22-203ENST00000460620 LAMB4A4D0S4 1761 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 PLB1Q6P1J6 1458 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 MUC4Q99102 2169 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 RIMBP3CA6NJZ7 1639 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 RIMBP3BA6NNM3 1639 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 ANK1P16157 1881 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 CAMSAP1Q5T5Y3 1602 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 MAP3K5Q99683 1374 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 RIMBP3Q9UFD9 1639 aa0.15□□□□□ -2.39
PTPN22-203ENST00000460620 XIRP1Q702N8 1843 aaKnown RBP0.15□□□□□ -2.39
PTPN22-203ENST00000460620 MED1Q15648 1581 aaPredicted RBP0.15□□□□□ -2.39
PTPN22-203ENST00000460620 IGKV3D-7A0A0C4DH55 119 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 IGKV3OR2-268A0A0C4DH90 116 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 ODAMA1E959 279 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 TRAPPC13A5PLN9 417 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 K7ERJ3 54 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 M0R036 132 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 PIRO00625 290 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 HMGB3O15347 200 aaKnown RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR2T1O43869 369 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 PDE6DO43924 150 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 KLF7O75840 302 aaPredicted RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR5F1O95221 314 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 GADD45GO95257 159 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 TCL1BO95988 128 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SERPINA1P01009 418 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SERPINE1P05121 402 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CD2P06729 351 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CTXN2P0C2S0 81 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SMIM10L2AP0DMW4 78 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SMIM10L2BP0DMW5 78 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CYBAP13498 195 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 ZNF25P17030 456 aaPredicted RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 G0S2P27469 103 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 RNASE4P34096 147 aaKnown RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 G6PCP35575 357 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 PPP1R2P41236 205 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CAPZBP47756 277 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 ATP5G3P48201 142 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 PSME3P61289 254 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 RHOBP62745 196 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 HIST1H4AP62805 103 aaKnown RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SRSF6Q13247 344 aaKnown RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 RHEBQ15382 184 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 HIST3H3Q16695 136 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 LINC01554Q52M75 96 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SPANXN3Q5MJ09 141 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 BRMS1LQ5PSV4 323 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 HACD4Q5VWC8 232 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 PPP1R2P3Q6NXS1 205 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 UNQ6190/PRO20217Q6UXQ8 127 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 ZNF826PQ6ZT77 177 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 MIR17HGQ75NE6 70 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 C20orf196Q8IYI0 205 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 KRT222Q8N1A0 295 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 HIST3H2BBQ8N257 126 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 C12orf45Q8N5I9 185 aaPredicted RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 C3orf56Q8N813 242 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR4E2Q8NGC2 313 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR52L1Q8NGH7 329 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR8D4Q8NGM9 314 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR13C4Q8NGS5 318 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 OR13D1Q8NGV5 346 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CDC26Q8NHZ8 85 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 MCFD2Q8NI22 146 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 ZNF418Q8TF45 676 aaPredicted RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CT55Q8WUE5 264 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 C11orf40Q8WZ69 217 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 GPR146Q96CH1 333 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SLAMF6Q96DU3 332 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 SCGB3A1Q96QR1 104 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 HOPXQ9BPY8 73 aaPredicted RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 XAGE1AQ9HD64 81 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 CDC42SE1Q9NRR8 79 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 TAS2R7Q9NYW3 318 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 RSL24D1Q9UHA3 163 aaKnown RBP0.14□□□□□ -2.39
PTPN22-203ENST00000460620 FBXO5Q9UKT4 447 aa0.14□□□□□ -2.39
PTPN22-203ENST00000460620 ZFP30Q9Y2G7 519 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms