RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 PRR20AP86496 221 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 ZNF329Q86UD4 541 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 SAT2Q96F10 170 aaPredicted RBP13.15□□□□□ -0.3
NELFCD-201ENST00000460601 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
NELFCD-201ENST00000460601 FBXL7Q9UJT9 491 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 DNAJC9-AS1A6NH13 148 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
NELFCD-201ENST00000460601 LINC00869P0C866 280 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 RAB5CP51148 216 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 RHOGP84095 191 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 C15orf32Q32M92 178 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 OR10G4Q8NGN3 311 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 OR10G9Q8NGN4 311 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 OR10G7Q8NGN6 311 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 OR1L6Q8NGR2 347 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 SLC39A9Q9NUM3 307 aa13.15□□□□□ -0.3
NELFCD-201ENST00000460601 TSPAN15O95858 294 aa13.14□□□□□ -0.31
NELFCD-201ENST00000460601 CD99P14209 185 aa13.14□□□□□ -0.31
NELFCD-201ENST00000460601 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
NELFCD-201ENST00000460601 CRIP2P52943 208 aaPredicted RBP13.14□□□□□ -0.31
NELFCD-201ENST00000460601 FGF8P55075 233 aaPredicted RBP13.14□□□□□ -0.31
NELFCD-201ENST00000460601 CCL20P78556 96 aa13.14□□□□□ -0.31
NELFCD-201ENST00000460601 RAB31Q13636 194 aa13.14□□□□□ -0.31
NELFCD-201ENST00000460601 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
NELFCD-201ENST00000460601 SFT2D1Q8WV19 159 aa13.14□□□□□ -0.31
NELFCD-201ENST00000460601 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
NELFCD-201ENST00000460601 H2AFB1P0C5Y9 115 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 IGLC1P0CG04 106 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 RPL29P47914 159 aaKnown RBP13.13□□□□□ -0.31
NELFCD-201ENST00000460601 LCN15Q6UWW0 184 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 RBMS3Q6XE24 437 aaKnown RBP13.13□□□□□ -0.31
NELFCD-201ENST00000460601 CYP2G1PQ6ZSU1 146 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 ZNF702PQ9H963 129 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 NSD1Q96L73 2696 aaPredicted RBP13.13□□□□□ -0.31
NELFCD-201ENST00000460601 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 INAFM1C9JVW0 142 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 AP4M1O00189 453 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 APOC3P02656 99 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 SRD5A1P18405 259 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 SEPSECSQ9HD40 501 aaKnown RBP13.13□□□□□ -0.31
NELFCD-201ENST00000460601 DOK5Q9P104 306 aa13.13□□□□□ -0.31
NELFCD-201ENST00000460601 IGKV1-17P01599 117 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
NELFCD-201ENST00000460601 TIGITQ495A1 244 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 SPSB3Q6PJ21 355 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 LYPD6BQ8NI32 183 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 THYN1Q9P016 225 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 OR2T8A6NH00 312 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 SPATA31B1PQ5VZV4 182 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 ATRAIDQ6UW56 229 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 C21orf62Q9NYP8 219 aa13.12□□□□□ -0.31
NELFCD-201ENST00000460601 CLN5O75503 358 aa13.11□□□□□ -0.31
NELFCD-201ENST00000460601 S100A12P80511 92 aa13.11□□□□□ -0.31
NELFCD-201ENST00000460601 Q56UQ5 140 aa13.11□□□□□ -0.31
NELFCD-201ENST00000460601 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
NELFCD-201ENST00000460601 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
NELFCD-201ENST00000460601 TMEM160Q9NX00 188 aa13.11□□□□□ -0.31
NELFCD-201ENST00000460601 CFHR3Q02985 330 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
NELFCD-201ENST00000460601 RAB24Q969Q5 203 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 CCDC140Q96MF4 163 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
NELFCD-201ENST00000460601 IGHV3-35A0A0C4DH35 117 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 ZNF98A6NK75 572 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 CYB5BO43169 146 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 GNG7O60262 68 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 TRGV3P03979 118 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 MORN5Q5VZ52 161 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 NECAP1Q8NC96 275 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 TRGV9Q99603 122 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 NKX6-2Q9C056 277 aaPredicted RBP13.1□□□□□ -0.31
NELFCD-201ENST00000460601 PRSS22Q9GZN4 317 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 TMEM231Q9H6L2 316 aa13.1□□□□□ -0.31
NELFCD-201ENST00000460601 F8P00451 2351 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 MAP1LC3B2A6NCE7 125 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 PCP4L1A6NKN8 68 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 MBP02144 154 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 PSG1P11464 419 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 CDC34P49427 236 aaPredicted RBP13.09□□□□□ -0.31
NELFCD-201ENST00000460601 TPPP2P59282 170 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 DPPA3Q6W0C5 159 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 MAP1LC3BQ9GZQ8 125 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 PF4V1P10720 104 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 HIST1H1BP16401 226 aaKnown RBP13.09□□□□□ -0.31
NELFCD-201ENST00000460601 GPR183P32249 361 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 MFAP4P55083 255 aa13.09□□□□□ -0.31
NELFCD-201ENST00000460601 UQCC3Q6UW78 93 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms