RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 C9orf84Q5VXU9 1444 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 TRAV26-2A0A0B4J265 109 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 CLDN25C9JDP6 229 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 GOLGA6L19H0YKK7 550 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 CHP2O43745 196 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 DCTN3O75935 186 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 ACOT6Q3I5F7 207 aaPredicted RBP0.08□□□□□ -2.4
TTC3-211ENST00000460328 SPOPLQ6IQ16 392 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 GKN2Q86XP6 184 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 C20orf196Q8IYI0 205 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 OR8D4Q8NGM9 314 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 PATE1Q8WXA2 126 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 ADAT3Q96EY9 351 aaPredicted RBP0.08□□□□□ -2.4
TTC3-211ENST00000460328 COMMD5Q9GZQ3 224 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 RASL12Q9NYN1 266 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 MRPL27Q9P0M9 148 aaKnown RBP0.08□□□□□ -2.4
TTC3-211ENST00000460328 GUCA1BQ9UMX6 200 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 UTP11Q9Y3A2 253 aaKnown RBP0.08□□□□□ -2.4
TTC3-211ENST00000460328 FRAS1Q86XX4 4008 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 NAV2Q8IVL1 2488 aa0.08□□□□□ -2.4
TTC3-211ENST00000460328 ANKRD17O75179 2603 aaKnown RBP0.07□□□□□ -2.4
TTC3-211ENST00000460328 OR2T8A6NH00 312 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 PROSCO94903 275 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 IFNA10P01566 189 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 IFNA5P01569 189 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 OR4E1P0C645 316 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 CD79AP11912 226 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 PSG9Q00887 426 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 ESRGQ1W209 222 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 Q8IYB0 196 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 LINC00301Q8NCQ3 95 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 C8orf76Q96K31 380 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 MRPS26Q9BYN8 205 aaKnown RBP0.07□□□□□ -2.4
TTC3-211ENST00000460328 C6orf62Q9GZU0 229 aaPredicted RBP0.07□□□□□ -2.4
TTC3-211ENST00000460328 RNASE7Q9H1E1 156 aaKnown RBP0.07□□□□□ -2.4
TTC3-211ENST00000460328 MIXL1Q9H2W2 232 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 NKIRAS1Q9NYS0 192 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 HS3ST2Q9Y278 367 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 SLC35A3Q9Y2D2 325 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 SCN3AQ9NY46 2000 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 SNAPC4Q5SXM2 1469 aa0.07□□□□□ -2.4
TTC3-211ENST00000460328 A0A0D9SG42 100 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 A0A1W2PPM0 123 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 PIRO00625 290 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 CETN3O15182 167 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 CCL16O15467 120 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 OR2B3O76000 313 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 GADD45GO95257 159 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 CNIH1O95406 144 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 AHSA1O95433 338 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 SMIM17P0DL12 118 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 SMIM10L2AP0DMW4 78 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 SMIM10L2BP0DMW5 78 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 S100A4P26447 101 aaKnown RBP0.06□□□□□ -2.4
TTC3-211ENST00000460328 SRIP30626 198 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 NKX2-5P52952 324 aaPredicted RBP0.06□□□□□ -2.4
TTC3-211ENST00000460328 PSME3P61289 254 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 COTL1Q14019 142 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 HIST3H3Q16695 136 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 DCSTAMPQ9H295 470 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 C14orf105Q9NVL8 296 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 CHCHD2Q9Y6H1 151 aaPredicted RBP0.06□□□□□ -2.4
TTC3-211ENST00000460328 ALPK3Q96L96 1907 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 TAF1LQ8IZX4 1826 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 NUP155O75694 1391 aa0.06□□□□□ -2.4
TTC3-211ENST00000460328 PHRF1Q9P1Y6 1649 aaKnown RBP0.05□□□□□ -2.4
TTC3-211ENST00000460328 TRBV6-4A0A1B0GX49 114 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 TLCD2A6NGC4 264 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 B4DSR2 109 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 M0R378 163 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 LYPLA2O95372 231 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 CD2P06729 351 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 CIRBPQ14011 172 aaKnown RBP0.05□□□□□ -2.4
TTC3-211ENST00000460328 FAM74A1Q5RGS3 127 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 KRTAP26-1Q6PEX3 210 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 TRAPPC6BQ86SZ2 158 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 KRT222Q8N1A0 295 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 OR52L1Q8NGH7 329 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 SLC25A40Q8TBP6 338 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 SLAMF6Q96DU3 332 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 OR52E6Q96RD3 313 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 BCL2L10Q9HD36 194 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 APCP25054 2843 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 MED1Q15648 1581 aaPredicted RBP0.05□□□□□ -2.4
TTC3-211ENST00000460328 PLXND1Q9Y4D7 1925 aa0.05□□□□□ -2.4
TTC3-211ENST00000460328 CNTRLQ7Z7A1 2325 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 NEO1Q92859 1461 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 A0A087X0T9 212 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 CLDN24A6NM45 220 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 ZNF682O95780 498 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 TTRP02766 147 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 IFNA16P05015 189 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 SERPINE1P05121 402 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 CASP1P29466 404 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 HOXA6P31267 233 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 SULT1A1P50225 295 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 RHOBP62745 196 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 DYNLT1P63172 113 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 TSNQ15631 228 aaKnown RBP0.04□□□□□ -2.4
TTC3-211ENST00000460328 LINC00322Q6ZN03 302 aaPredicted RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms