RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 Q56UQ5 140 aa12.6□□□□□ -0.39
LMNB1-203ENST00000460265 OR2T8A6NH00 312 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.396e-10■■■■□ 19.3
LMNB1-203ENST00000460265 TBR1Q16650 682 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
LMNB1-203ENST00000460265 ST6GALNAC6Q969X2 333 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 TACC2O95359 2948 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 GFRA3O60609 400 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 BMI1P35226 326 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 HES1Q14469 280 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 PRNDQ9UKY0 176 aa12.59□□□□□ -0.39
LMNB1-203ENST00000460265 PRRX1P54821 245 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 RHOBP62745 196 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 MPV17L2Q567V2 206 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 SPATA31B1PQ5VZV4 182 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 ONECUT1Q9UBC0 465 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 RAXQ9Y2V3 346 aa12.58□□□□□ -0.39
LMNB1-203ENST00000460265 IGLV3-9A0A075B6K5 115 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.58□□□□□ -0.4
LMNB1-203ENST00000460265 ESDP10768 282 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 ZNF788Q6ZQV5 615 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 OR5B3Q8NH48 314 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 Q8TCH9 128 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 UHRF2Q96PU4 802 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 WDR83OSQ9Y284 106 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 IGHV2-26A0A0B4J1V2 119 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 CNIH1O95406 144 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 SAA1P0DJI8 122 aaPredicted RBP12.58□□□□□ -0.4
LMNB1-203ENST00000460265 Q8N976 141 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 RNASE6Q93091 150 aaKnown RBP12.58□□□□□ -0.4
LMNB1-203ENST00000460265 CLUHP3Q96NS8 147 aa12.58□□□□□ -0.4
LMNB1-203ENST00000460265 NUDT3O95989 172 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 SLC35B1P78383 322 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 DIAPH2-AS1Q14236 149 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 RPUSD1Q9UJJ7 312 aaKnown RBP12.57□□□□□ -0.4
LMNB1-203ENST00000460265 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 CSPG4Q6UVK1 2322 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 KALRNO60229 2985 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 FRMD6-AS1P0C7T7 363 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 ORM2P19652 201 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 TNXAQ16473 311 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 TMEM200BQ69YZ2 307 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 PNKDQ8N490 385 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 C15orf61A6NNL5 157 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 F2RL2O00254 374 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 PDE6DO43924 150 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 SAP30O75446 220 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 GOSR1O95249 250 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 Q0VG73 95 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 TIMM9Q9Y5J7 89 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 ZZEF1O43149 2961 aa12.57□□□□□ -0.4
LMNB1-203ENST00000460265 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 RPL8P62917 257 aaKnown RBP12.56□□□□□ -0.4
LMNB1-203ENST00000460265 ZFYVE26Q68DK2 2539 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 A0A1W2PS18 150 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 SRRM4A7MD48 611 aaKnown RBP12.56□□□□□ -0.4
LMNB1-203ENST00000460265 CT45A6P0DMU7 189 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 CT45A5P0DMU8 189 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 CT45A7P0DMV0 189 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 PMCHL1Q16048 86 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 FAM169BQ8N8A8 192 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 OR2T6Q8NHC8 308 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 MGST2Q99735 147 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 KCNIP2Q9NS61 270 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 CORTO00230 105 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 ZNF324O75467 553 aaPredicted RBP12.56□□□□□ -0.4
LMNB1-203ENST00000460265 FOXH1O75593 365 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 OR8I2Q8N0Y5 310 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 ZNF439Q8NDP4 499 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 KCNS1Q96KK3 526 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 SGK494Q96LW2 274 aa12.56□□□□□ -0.4
LMNB1-203ENST00000460265 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
LMNB1-203ENST00000460265 MUC15Q8N387 334 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 OCC1Q8TAD7 63 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 RCHY1Q96PM5 261 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 GGTLC1Q9BX51 225 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 INSIG2Q9Y5U4 225 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 SCO2A0A1W2PP80 73 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 CXorf1O96002 111 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 LHBP01229 141 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 GRNP28799 593 aaKnown RBP12.55□□□□□ -0.4
LMNB1-203ENST00000460265 SRIP30626 198 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 TCL1AP56279 114 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 MIR17HGQ75NE6 70 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
LMNB1-203ENST00000460265 CLEC7AQ9BXN2 247 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 IL36BQ9NZH7 164 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 NBEAP1P0C6P0 100 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 CD24P25063 80 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 CFHR2P36980 270 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 NABP2Q9BQ15 211 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 HILPDAQ9Y5L2 63 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms