RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GPR61Q9BZJ8 451 aa11.96□□□□□ -0.49
SDF4-204ENST00000459994 C21orf62Q9NYP8 219 aa11.96□□□□□ -0.49
SDF4-204ENST00000459994 TRBV7-1A0A0A6YYK4 115 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 RNF222A6NCQ9 220 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 MFSD2BA6NFX1 497 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 ARPC5O15511 151 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 SLURP1P55000 103 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 MFAP4P55083 255 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 RUNX1Q01196 453 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 DEFA5Q01523 94 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 SLC38A11Q08AI6 406 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 TMEM217Q8N7C4 229 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 ZNF502Q8TBZ5 544 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 MFFQ9GZY8 342 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 ZC4H2Q9NQZ6 224 aa11.95□□□□□ -0.5
SDF4-204ENST00000459994 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
SDF4-204ENST00000459994 IGHV4OR15-8A0A075B7B6 117 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 A0A087WW49 117 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 NPBWR1P48145 328 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 ZNF616Q08AN1 781 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 OR2F1Q13607 317 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 GAMTQ14353 236 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 ZNF345Q14585 488 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 C9orf66Q5T8R8 295 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 BSCL2Q96G97 398 aaPredicted RBP11.94□□□□□ -0.5
SDF4-204ENST00000459994 SLC35E1Q96K37 410 aa11.94□□□□□ -0.5
SDF4-204ENST00000459994 LSM4Q9Y4Z0 139 aaKnown RBP11.94□□□□□ -0.5
SDF4-204ENST00000459994 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
SDF4-204ENST00000459994 IGHV3-11P01762 117 aa11.93□□□□□ -0.5
SDF4-204ENST00000459994 VWC2Q2TAL6 325 aa11.93□□□□□ -0.5
SDF4-204ENST00000459994 OR5C1Q8NGR4 320 aa11.93□□□□□ -0.5
SDF4-204ENST00000459994 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
SDF4-204ENST00000459994 B9D2Q9BPU9 175 aa11.93□□□□□ -0.5
SDF4-204ENST00000459994 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
SDF4-204ENST00000459994 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
SDF4-204ENST00000459994 SORL1Q92673 2214 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 A0A0D9SG52 128 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 F8W735 103 aaPredicted RBP11.92□□□□□ -0.5
SDF4-204ENST00000459994 CLN5O75503 358 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 DFFBO76075 338 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
SDF4-204ENST00000459994 RND2P52198 227 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 LILRB2Q8N423 598 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 NPIPB3Q92617 1050 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 NPVFQ9HCQ7 196 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 UQCC1Q9NVA1 299 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 S4R3C0 116 aa11.92□□□□□ -0.5
SDF4-204ENST00000459994 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
SDF4-204ENST00000459994 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 CLEC3BP05452 202 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 CXCL2P19875 107 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 EIF2B2P49770 351 aaKnown RBP11.91□□□□□ -0.5
SDF4-204ENST00000459994 Q56UQ5 140 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 THAP8Q8NA92 274 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 ATP5SQ99766 215 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 PEF1Q9UBV8 284 aaKnown RBP11.91□□□□□ -0.5
SDF4-204ENST00000459994 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
SDF4-204ENST00000459994 OVOL1O14753 267 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 TAAR5O14804 337 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 GNG7O60262 68 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 AP2S1P53680 142 aaPredicted RBP11.9□□□□□ -0.5
SDF4-204ENST00000459994 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 CLINT1Q14677 625 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 CLEC19AQ6UXS0 136 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 WDR83OSQ9Y284 106 aa11.9□□□□□ -0.5
SDF4-204ENST00000459994 SMCO3A2RU48 225 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 LINC01619G3V211 115 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 TGOLN2O43493 480 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 SCGB2A1O75556 95 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 CTSGP08311 255 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 IGLC1P0CG04 106 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 GPR183P32249 361 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 LGALSLQ3ZCW2 172 aaPredicted RBP11.89□□□□□ -0.51
SDF4-204ENST00000459994 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
SDF4-204ENST00000459994 WFDC1Q9HC57 220 aa11.89□□□□□ -0.51
SDF4-204ENST00000459994 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
SDF4-204ENST00000459994 IGKV1OR2-108A0A075B7D4 117 aa11.88□□□□□ -0.51
SDF4-204ENST00000459994 ANKRD34BA5PLL1 514 aa11.88□□□□□ -0.51
SDF4-204ENST00000459994 OR2T8A6NH00 312 aa11.88□□□□□ -0.51
SDF4-204ENST00000459994 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
SDF4-204ENST00000459994 MPDU1O75352 247 aa11.88□□□□□ -0.51
SDF4-204ENST00000459994 IFNA5P01569 189 aa11.88□□□□□ -0.51
SDF4-204ENST00000459994 IGKV1-17P01599 117 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms