RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	IGHV3-49	A0A0A0MS15	119 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	IGHV3-74	A0A0B4J1X5	117 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	C5orf51	A6NDU8	294 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783		K7EMT4	169 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	GOSR2	O14653	212 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	SCAF4	O95104	1147 aa	Known RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	PTTG1	O95997	202 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	SLC25A4	P12235	298 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	ELL	P55199	621 aa	Predicted RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	ATP5I	P56385	69 aa	Predicted RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	H2BFS	P57053	126 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	REL	Q04864	619 aa	Predicted RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	RAB32	Q13637	225 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	TMEM14EP	Q6UXP3	125 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	ZNF600	Q6ZNG1	722 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	NOXA1	Q86UR1	476 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	LILRB2	Q8N423	598 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	GPN1	Q9HCN4	374 aa	Predicted RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	PALMD	Q9NP74	551 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	DAZ1	Q9NQZ3	744 aa	Known RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	PSENEN	Q9NZ42	101 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	SMPX	Q9UHP9	88 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	PAIP2B	Q9ULR5	123 aa	Known RBP	7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	UFC1	Q9Y3C8	167 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	ALG5	Q9Y673	324 aa		7.72	□□□□□ -1.17
MRPL55-223	ENST00000459783	PRKDC	P78527	4128 aa	Known RBP	7.71	□□□□□ -1.17
MRPL55-223	ENST00000459783		H0YIZ8	118 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	YIF1A	O95070	293 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	LY86	O95711	162 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR10J1	P30954	320 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	GPX4	P36969	197 aa	Predicted RBP	7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	ZNF90	Q03938	601 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	GSG1L	Q6UXU4	331 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	ACOT7L	Q6ZUV0	252 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR1S2	Q8NGQ3	325 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	DYNLRB2	Q8TF09	96 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	RAB40C	Q96S21	281 aa		7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	MRPL27	Q9P0M9	148 aa	Known RBP	7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	STRAP	Q9Y3F4	350 aa	Known RBP	7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	LSM5	Q9Y4Y9	91 aa	Known RBP	7.71	□□□□□ -1.18
MRPL55-223	ENST00000459783	IGHV7-4-1	A0A0J9YVY3	117 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	CHEK1	O14757	476 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	TSC22D2	O75157	780 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	METTL15P1	P0C7V9	234 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	TAS2R30	P59541	319 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	YPEL3	P61236	119 aa	Predicted RBP	7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	DCTN2	Q13561	401 aa	Known RBP	7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	USF2	Q15853	346 aa	Predicted RBP	7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	ETFRF1	Q6IPR1	90 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	STPG3	Q8N7X2	389 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	THAP8	Q8NA92	274 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR2K2	Q8NGT1	345 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	ST8SIA2	Q92186	375 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	MARC2	Q969Z3	335 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	RNF2	Q99496	336 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	RHPN1-AS1	Q9BWJ2	59 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	WFDC10A	Q9H1F0	79 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	TECR	Q9NZ01	308 aa	Known RBP	7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783		U3KQE9	123 aa		7.7	□□□□□ -1.18
MRPL55-223	ENST00000459783	NBEAL2	Q6ZNJ1	2754 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	TRAV30	A0A087WSZ9	112 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	IGHV3-66	A0A0C4DH42	116 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	IGSF23	A1L1A6	192 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	FAM24A	A6NFZ4	105 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	TOMM40	O96008	361 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	CD7	P09564	240 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	PSG1	P11464	419 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	CXCL3	P19876	107 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	S100A10	P60903	97 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	RAB11A	P62491	216 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	OXA1L	Q15070	435 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	FAM90A2P	Q658T7	463 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR8G2P	Q6IF36	304 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	LCN12	Q6JVE5	192 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	SLC35E1	Q96K37	410 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	VSIR	Q9H7M9	311 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	C19orf73	Q9NVV2	129 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR5AC2	Q9NZP5	309 aa		7.69	□□□□□ -1.18
MRPL55-223	ENST00000459783	TRAV14DV4	A0A0A6YYC5	116 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	GATA2	P23769	480 aa	Predicted RBP	7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	CRYBB3	P26998	211 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	RRAS2	P62070	204 aa	Predicted RBP	7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	RPP30	P78346	268 aa	Known RBP	7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR2F1	Q13607	317 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	GUCA2B	Q16661	112 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	OR11H7	Q8NGC8	314 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	TRGV9	Q99603	122 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	MGAT4C	Q9UBM8	478 aa		7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	ZMAT5	Q9UDW3	170 aa	Known RBP	7.68	□□□□□ -1.18
MRPL55-223	ENST00000459783	SORL1	Q92673	2214 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	ZFP92	A6NM28	416 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	TSPAN4	O14817	238 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	SSNA1	O43805	119 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	DEDD	O75618	318 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	CST7	O76096	145 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	IL4	P05112	153 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	RD3L	P0DJH9	198 aa		7.67	□□□□□ -1.18
MRPL55-223	ENST00000459783	DLK1	P80370	383 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms