RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-217ENST00000459625 ZNF883P0CG24 379 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 MORN2Q502X0 79 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 IGHV2-26A0A0B4J1V2 119 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 DLX4Q92988 240 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-217ENST00000459625 ERCC8Q13216 396 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 MRPS18AQ9NVS2 196 aaKnown RBP13.3□□□□□ -0.28
HDAC7-217ENST00000459625 SMIM10L1P0DMW3 83 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 SMIM10Q96HG1 83 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 PLNP26678 52 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 TMEM126AQ9H061 195 aa13.3□□□□□ -0.28
HDAC7-217ENST00000459625 MESP1Q9BRJ9 268 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 MYOFQ9NZM1 2061 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 A0A087WWL8 130 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 IZUMO1RA6ND01 250 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 PVRIGQ6DKI7 326 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 RALGAPA1Q6GYQ0 2036 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
HDAC7-217ENST00000459625 SSBP2P81877 361 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-217ENST00000459625 DERL1Q9BUN8 251 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 TMEM14DPA8MWL7 114 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 F8VVB4 439 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 F8VWA3 439 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 ZNF562Q6V9R5 426 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 C1QTNF5Q9BXJ0 243 aa13.29□□□□□ -0.28
HDAC7-217ENST00000459625 DAD1P61803 113 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 Q5BKY6 102 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 LINC01356Q8N9X3 169 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 RREB1Q92766 1687 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 MS4A6AQ9H2W1 248 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 DDTP30046 118 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 XCL2Q9UBD3 114 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 DMRTC2Q8IXT2 367 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-217ENST00000459625 BPESC1Q9GZL8 116 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 OVOL1O14753 267 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 DPM2O94777 84 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 TMEM200BQ69YZ2 307 aa13.28□□□□□ -0.28
HDAC7-217ENST00000459625 PMS2P5A8MQ11 134 aa13.27□□□□□ -0.28
HDAC7-217ENST00000459625 EPDR1Q9UM22 224 aa13.27□□□□□ -0.28
HDAC7-217ENST00000459625 ZNF561-AS1K7EIQ3 104 aa13.27□□□□□ -0.28
HDAC7-217ENST00000459625 PSMG3Q9BT73 122 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-217ENST00000459625 A0A0G2JNJ9 132 aa13.27□□□□□ -0.29
HDAC7-217ENST00000459625 HOXD3P31249 432 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-217ENST00000459625 UCP3P55916 312 aa13.27□□□□□ -0.29
HDAC7-217ENST00000459625 TEX38Q6PEX7 206 aa13.27□□□□□ -0.29
HDAC7-217ENST00000459625 MORN3Q6PF18 240 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-217ENST00000459625 SPSB3Q6PJ21 355 aa13.27□□□□□ -0.29
HDAC7-217ENST00000459625 Q9UFV3 132 aa13.27□□□□□ -0.29
HDAC7-217ENST00000459625 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-217ENST00000459625 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.29
HDAC7-217ENST00000459625 MEGF9Q9H1U4 602 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 TCRAP04437 139 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 Q8TAT8 98 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 ORAOV1Q8WV07 137 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 FOCADQ5VW36 1801 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 CD59P13987 128 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 ADMP35318 185 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 RPUSD1Q9UJJ7 312 aaKnown RBP13.26□□□□□ -0.29
HDAC7-217ENST00000459625 BCORQ6W2J9 1755 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 C15orf61A6NNL5 157 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 PSPNO60542 156 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 SS18Q15532 418 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 VWC2LB2RUY7 222 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 CMC4P56277 68 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-217ENST00000459625 KIAA1551Q9HCM1 1747 aa13.26□□□□□ -0.29
HDAC7-217ENST00000459625 IGKCP01834 107 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 NMBP08949 121 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 LINC01590Q5TEZ4 76 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 PPP1R3EQ9H7J1 279 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 PRTN3P24158 256 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 CTHRC1Q96CG8 243 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 CABIN1Q9Y6J0 2220 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 C1QTNF9P0C862 333 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 IGKV1D-13A0A0B4J2D9 117 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 J3QW42 95 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 ITGB1BP1O14713 200 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 NDUFS5O43920 106 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 IGKV1-13P0DP09 117 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 DEFB131AP59861 70 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 PRCDQ00LT1 54 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 FGFBP3Q8TAT2 258 aa13.25□□□□□ -0.29
HDAC7-217ENST00000459625 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 COL8A2P25067 703 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 PQLC2LA1A4F0 135 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 CLPSL2Q6UWE3 100 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 TEX43Q6ZNM6 134 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 CLDN16Q9Y5I7 305 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 ATP5IP56385 69 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-217ENST00000459625 PRR30Q53SZ7 412 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-217ENST00000459625 C20orf204Q6ZNR8 217 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 GAGE12JA6NER3 117 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 GAGE1Q13065 139 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 GAGE4Q13068 117 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 GAGE5Q13069 117 aa13.24□□□□□ -0.29
HDAC7-217ENST00000459625 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms