RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 HIF1ANQ9NWT6 349 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 PRNDQ9UKY0 176 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 MRPS16Q9Y3D3 137 aaKnown RBP6.93□□□□□ -1.3
VPS50-208ENST00000458707 TECTAO75443 2155 aa6.93□□□□□ -1.3
VPS50-208ENST00000458707 PSMB11A5LHX3 300 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 SPINK4O60575 86 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 APCSP02743 223 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 FABP6P51161 128 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 HNRNPA3P51991 378 aaKnown RBP6.92□□□□□ -1.3
VPS50-208ENST00000458707 KLF5Q13887 457 aaPredicted RBP6.92□□□□□ -1.3
VPS50-208ENST00000458707 UTF1Q5T230 341 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 FAM71F2Q6NXP2 309 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 Q6ZN92 141 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 GCSAMQ8N6F7 178 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 OR5B3Q8NH48 314 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 LOXL4Q96JB6 756 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 SLC25A33Q9BSK2 321 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 OR51B2Q9Y5P1 312 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 J3QR06 171 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 UPK2O00526 184 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 OR7C2O60412 319 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 LHBP01229 141 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 IGHG3P01860 377 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 C8orf88P0DMB2 117 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 USF1P22415 310 aaPredicted RBP6.92□□□□□ -1.3
VPS50-208ENST00000458707 TCL1AP56279 114 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 SLC35B1P78383 322 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 SSBP2P81877 361 aaPredicted RBP6.92□□□□□ -1.3
VPS50-208ENST00000458707 TMEM164Q5U3C3 297 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 MRPL54Q6P161 138 aaKnown RBP6.92□□□□□ -1.3
VPS50-208ENST00000458707 TMEM178AQ8NBL3 297 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 OR1L8Q8NGR8 309 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 BORCS7Q96B45 105 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 FAM167A-AS1Q96KT0 104 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 PLEKHA3Q9HB20 300 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 FZR1Q9UM11 496 aa6.92□□□□□ -1.3
VPS50-208ENST00000458707 CACNA1HO95180 2353 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 MAST4O15021 2626 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 IGHV2-26A0A0B4J1V2 119 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 KBTBD11-OT1A0A1B0GTJ5 212 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 LAMTOR5O43504 91 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 OR2J3O76001 311 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 BRI3O95415 125 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 IGHV3-13P01766 116 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 IGHV3-7P01780 117 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 MYOD1P15172 320 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 TSPOP30536 169 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 KIR2DL2P43627 348 aaPredicted RBP6.91□□□□□ -1.3
VPS50-208ENST00000458707 RAB9AP51151 201 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 TBR1Q16650 682 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 STUMQ69YW2 141 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 SPACA3Q8IXA5 215 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 ZNRF1Q8ND25 227 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 OR2Z1Q8NG97 314 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 ZNF714Q96N38 554 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
VPS50-208ENST00000458707 ZNF331Q9NQX6 463 aaPredicted RBP6.91□□□□□ -1.3
VPS50-208ENST00000458707 KNTC1P50748 2209 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 ZNF292O60281 2723 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 CELSR3Q9NYQ7 3312 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 IGHV1-18A0A0C4DH31 117 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 TEX50A0A1B0GTY4 177 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 B9A039 149 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 TOX4O94842 621 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 RNASE2P10153 161 aaKnown RBP6.9□□□□□ -1.3
VPS50-208ENST00000458707 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
VPS50-208ENST00000458707 CD69Q07108 199 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 MOB3BQ86TA1 216 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 FAM169BQ8N8A8 192 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 OR8B3Q8NGG8 313 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 FAM168AQ92567 244 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 GRAMD2BQ96HH9 432 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 OR8B2Q96RD0 313 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 SLC25A2Q9BXI2 301 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 CLEC7AQ9BXN2 247 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 WNT10AQ9GZT5 417 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 BET1LQ9NYM9 111 aa6.9□□□□□ -1.3
VPS50-208ENST00000458707 DMDP11532 3685 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 IGHV3OR15-7A0A075B7D8 119 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 INS-IGF2F8WCM5 200 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 H0YJW9 148 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 GATA2P23769 480 aaPredicted RBP6.9□□□□□ -1.31
VPS50-208ENST00000458707 TNXAQ16473 311 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 TMEM30BQ3MIR4 351 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 GDF5OSQ5U4N7 250 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 OR9G1Q8NH87 305 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 LEAP2Q969E1 77 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 TRIB1Q96RU8 372 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 CHRDL1Q9BU40 450 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 HINT2Q9BX68 163 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 C7orf69Q9H7B7 122 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 SAP30LQ9HAJ7 183 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 GCM1Q9NP62 436 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 SERTAD4Q9NUC0 356 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 DKK4Q9UBT3 224 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 PPIAL4AQ9Y536 164 aa6.9□□□□□ -1.31
VPS50-208ENST00000458707 C2orf70A6NJV1 201 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms