RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 HNRNPCP07910 306 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDLBP-227ENST00000458564 ZNF705DP0CH99 300 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-227ENST00000458564 ZNF705BP0CI00 300 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-227ENST00000458564 SLC25A4P12235 298 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 HLA-DRB4P13762 266 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 PGAM2P15259 253 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 UCP1P25874 307 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 HTR2BP41595 481 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 YPEL3P61236 119 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-227ENST00000458564 MLANAQ16655 118 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 SNX29P2Q8IUI4 249 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 ARRDC1Q8N5I2 433 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 OR52E5Q8NH55 327 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 ENY2Q9NPA8 101 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 NRN1Q9NPD7 142 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 XCL2Q9UBD3 114 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 HLA-DRB4X5D2U9 266 aa7.46□□□□□ -1.22
HDLBP-227ENST00000458564 A0A0G2JRQ6 117 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 TEX48A0A1B0GUV7 120 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 SMIM9A6NGZ8 99 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 M0QYG6 137 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 M0R2N4 97 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 BUB3O43684 328 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 GSTZ1O43708 216 aaPredicted RBP7.45□□□□□ -1.22
HDLBP-227ENST00000458564 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 PI3P19957 117 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 TBPP20226 339 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 SPCS3P61009 180 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 USF2Q15853 346 aaPredicted RBP7.45□□□□□ -1.22
HDLBP-227ENST00000458564 TRIM16LQ309B1 348 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 C2orf83Q53S99 150 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 RNASE10Q5GAN6 216 aaKnown RBP7.45□□□□□ -1.22
HDLBP-227ENST00000458564 PRSS54Q6PEW0 395 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 RNASEH2CQ8TDP1 164 aaKnown RBP7.45□□□□□ -1.22
HDLBP-227ENST00000458564 Q8WTZ3 238 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 YIPF6Q96EC8 236 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 RRNAD1Q96FB5 475 aaKnown RBP7.45□□□□□ -1.22
HDLBP-227ENST00000458564 LRP1BQ9NZR2 4599 aa7.45□□□□□ -1.22
HDLBP-227ENST00000458564 ATP6V1G2O95670 118 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 IFNA10P01566 189 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 OR10J1P30954 320 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 NKX2-1P43699 371 aaPredicted RBP7.44□□□□□ -1.22
HDLBP-227ENST00000458564 RND2P52198 227 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 DHODHQ02127 395 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 RNF212Q495C1 297 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 SIGLEC15Q6ZMC9 328 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 Q6ZRM9 215 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 CCDC71LQ8N9Z2 235 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 COMMD3Q9UBI1 195 aa7.44□□□□□ -1.22
HDLBP-227ENST00000458564 CDS2O95674 445 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 TOMM40O96008 361 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 IFNA21P01568 189 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 CD3DP04234 171 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 IL4P05112 153 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 ELK1P19419 428 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 LSM3P62310 102 aaKnown RBP7.43□□□□□ -1.22
HDLBP-227ENST00000458564 OXA1LQ15070 435 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 SP6Q3SY56 376 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 SOHLH1Q5JUK2 328 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 SLC24A4Q8NFF2 622 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 ZFAND1Q8TCF1 268 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 TMEM170AQ8WVE7 144 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 TMEM222Q9H0R3 208 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.43□□□□□ -1.22
HDLBP-227ENST00000458564 COPZ2Q9P299 210 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 DKK2Q9UBU2 259 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 KLK11Q9UBX7 282 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 RFNGQ9Y644 331 aa7.43□□□□□ -1.22
HDLBP-227ENST00000458564 NXPH3O95157 252 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 NUP62P37198 522 aaPredicted RBP7.42□□□□□ -1.22
HDLBP-227ENST00000458564 ETFRF1Q6IPR1 90 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 FOXI2Q6ZQN5 318 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 UBE2DNLQ8IWF7 75 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 ZNF709Q8N972 641 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 OR13C8Q8NGS7 320 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 TERB2Q8NHR7 220 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 RNASE11Q8TAA1 199 aaKnown RBP7.42□□□□□ -1.22
HDLBP-227ENST00000458564 ABHD1Q96SE0 405 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 NIPSNAP3BQ9BS92 247 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 SAV1Q9H4B6 383 aaPredicted RBP7.42□□□□□ -1.22
HDLBP-227ENST00000458564 HEYLQ9NQ87 328 aaPredicted RBP7.42□□□□□ -1.22
HDLBP-227ENST00000458564 MTFP1Q9UDX5 166 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 CACFD1Q9UGQ2 172 aa7.42□□□□□ -1.22
HDLBP-227ENST00000458564 IGLV2-18A0A075B6J9 118 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 HPGDSO60760 199 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 RD3LP0DJH9 198 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 PSMB3P49720 205 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 FAM3BP58499 235 aaPredicted RBP7.41□□□□□ -1.22
HDLBP-227ENST00000458564 NCS1P62166 190 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 GDF5OSQ5U4N7 250 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 FAM222AQ5U5X8 452 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 OR8G2PQ6IF36 304 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 NOXA1Q86UR1 476 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 OR4D10Q8NGI6 311 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 OR52I2Q8NH67 350 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 LHFPL5Q8TAF8 219 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms