RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 A6NDX4 124 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 ZFP92A6NM28 416 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 CDC34P49427 236 aaPredicted RBP7.06□□□□□ -1.28
VPS50-207ENST00000458530 RND2P52198 227 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 RHOBP62745 196 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 PEA15Q15121 130 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 S100A7AQ86SG5 101 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 STPG3Q8N7X2 389 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 THAP8Q8NA92 274 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 TMEM116Q8NCL8 245 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 OR1L4Q8NGR5 311 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 FAM110DQ8TAY7 271 aaPredicted RBP7.06□□□□□ -1.28
VPS50-207ENST00000458530 SFT2D1Q8WV19 159 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 MBD3L1Q8WWY6 194 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
VPS50-207ENST00000458530 PFDN5Q99471 154 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 TRGV9Q99603 122 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 MAP1LC3BQ9GZQ8 125 aa7.06□□□□□ -1.28
VPS50-207ENST00000458530 GAR1Q9NY12 217 aaKnown RBP7.06□□□□□ -1.28
VPS50-207ENST00000458530 TRAV30A0A087WSZ9 112 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 TCRBV4S1A1TA0A5B7 111 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 SEC14L6B5MCN3 397 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 APELAP0DMC3 54 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 SRD5A1P18405 259 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 OR10J1P30954 320 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 S100A7P31151 101 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 NPBWR1P48145 328 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 CRIP2P52943 208 aaPredicted RBP7.05□□□□□ -1.28
VPS50-207ENST00000458530 TAS2R45P59539 299 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 AKIRIN2Q53H80 203 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 ACSM6Q6P461 480 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 FAM122CQ6P4D5 195 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 UNQ5815/PRO19632Q6UWF5 114 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 CYP2G1PQ6ZSU1 146 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 TMEM219Q86XT9 240 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 BPIFCQ8NFQ6 507 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 OR4X1Q8NH49 305 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 NARS2Q96I59 477 aaKnown RBP7.05□□□□□ -1.28
VPS50-207ENST00000458530 ZNF48Q96MX3 618 aaPredicted RBP7.05□□□□□ -1.28
VPS50-207ENST00000458530 FAM210AQ96ND0 272 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 MRPL32Q9BYC8 188 aaKnown RBP7.05□□□□□ -1.28
VPS50-207ENST00000458530 FNDC4Q9H6D8 234 aaPredicted RBP7.05□□□□□ -1.28
VPS50-207ENST00000458530 TREM1Q9NP99 234 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
VPS50-207ENST00000458530 IGLV11-55A0A075B6I3 123 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 H3BUA1 57 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 ATP6V0E1O15342 81 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 ZP3P21754 424 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 PSMB3P49720 205 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 FHITP49789 147 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 MFAP4P55083 255 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 NDPQ00604 133 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 LY6EQ16553 131 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 ECSCRQ19T08 205 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 DEFB112Q30KQ8 113 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 MIC13Q5XKP0 118 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 RBMS3Q6XE24 437 aaKnown RBP7.04□□□□□ -1.28
VPS50-207ENST00000458530 SLC35E3Q7Z769 313 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 PIFOQ8TCI5 191 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 GATAD1Q8WUU5 269 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 TXN2Q99757 166 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
VPS50-207ENST00000458530 EIF5A2Q9GZV4 153 aaKnown RBP7.04□□□□□ -1.28
VPS50-207ENST00000458530 SLC25A22Q9H936 323 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 MANBALQ9NQG1 85 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 TNFRSF19Q9NS68 423 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 ZNF580Q9UK33 172 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 TRRAPQ9Y4A5 3859 aa7.04□□□□□ -1.28
VPS50-207ENST00000458530 TRAV41A0A0B4J266 112 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 ANKRD34BA5PLL1 514 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 I3L2K1 104 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 AP4M1O00189 453 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 COX7A2P2O60397 106 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 CLN5O75503 358 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 CXorf1O96002 111 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 IGHG2P01859 326 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 LINC00869P0C866 280 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 SRP14P37108 136 aaKnown RBP7.03□□□□□ -1.28
VPS50-207ENST00000458530 IER3P46695 156 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 MFAP2P55001 183 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 PMS2P11Q13670 270 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 GUK1Q16774 197 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 KLK9Q2XQG4 91 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 FBLN7Q53RD9 439 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 KHDC3LQ587J8 217 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 C9orf152Q5JTZ5 239 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 TOR2AQ5JU69 321 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 LCN15Q6UWW0 184 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 Q6YL49 198 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 RPP25LQ8N5L8 163 aaKnown RBP7.03□□□□□ -1.28
VPS50-207ENST00000458530 TMEM86BQ8N661 226 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 OR2T6Q8NHC8 308 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 VN1R17PQ8TDU5 208 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 ATP6V0BQ99437 205 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 HSPB9Q9BQS6 159 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 VSIRQ9H7M9 311 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 ZNF355PQ9NSJ1 428 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 VPREB3Q9UKI3 123 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms