RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 IGHV4-4A0A075B6R2 117 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 CDS2O95674 445 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 HNRNPCP07910 306 aaKnown RBP eCLIP15.57■□□□□ 0.088e-7■■■□□ 18.2
CPNE1-220ENST00000458038 C4BPBP20851 252 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 SNRPD3P62318 126 aaKnown RBP15.57■□□□□ 0.08
CPNE1-220ENST00000458038 C2orf83Q53S99 150 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 ETFRF1Q6IPR1 90 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 C16orf54Q6UWD8 224 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 Q6ZTC4 211 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 NOXA1Q86UR1 476 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 TMEM229BQ8NBD8 167 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 OR52I2Q8NH67 350 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 ABHD1Q96SE0 405 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 TMEM222Q9H0R3 208 aa15.57■□□□□ 0.08
CPNE1-220ENST00000458038 HEYLQ9NQ87 328 aaPredicted RBP15.57■□□□□ 0.08
CPNE1-220ENST00000458038 ELOA3CA0A087WX78 387 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-220ENST00000458038 CD74P04233 296 aa15.56■□□□□ 0.08
CPNE1-220ENST00000458038 IGLC1P0CG04 106 aa15.56■□□□□ 0.08
CPNE1-220ENST00000458038 TAS2R19P59542 299 aa15.56■□□□□ 0.08
CPNE1-220ENST00000458038 OR13C8Q8NGS7 320 aa15.56■□□□□ 0.08
CPNE1-220ENST00000458038 GLMPQ8WWB7 406 aa15.56■□□□□ 0.08
CPNE1-220ENST00000458038 A0A0G2JRQ6 117 aa15.55■□□□□ 0.08
CPNE1-220ENST00000458038 GSTZ1O43708 216 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-220ENST00000458038 OR10J1P30954 320 aa15.55■□□□□ 0.08
CPNE1-220ENST00000458038 SSBP1Q04837 148 aaKnown RBP15.55■□□□□ 0.08
CPNE1-220ENST00000458038 PSMG4Q5JS54 123 aa15.55■□□□□ 0.08
CPNE1-220ENST00000458038 PRSS54Q6PEW0 395 aa15.55■□□□□ 0.08
CPNE1-220ENST00000458038 Q6ZRM9 215 aa15.55■□□□□ 0.08
CPNE1-220ENST00000458038 RBPMSQ93062 196 aaKnown RBP15.55■□□□□ 0.08
CPNE1-220ENST00000458038 RAB3DO95716 219 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 NPY1RP25929 384 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 RND2P52198 227 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 DHODHQ02127 395 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 SCGB2B2Q4G0G5 96 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 RNASE12Q5GAN4 147 aaKnown RBP15.54■□□□□ 0.08
CPNE1-220ENST00000458038 MARCH1Q8TCQ1 289 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 CLEC5AQ9NY25 188 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 EXTL2Q9UBQ6 330 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 C14orf166Q9Y224 244 aaKnown RBP15.54■□□□□ 0.08
CPNE1-220ENST00000458038 HERC2O95714 4834 aa15.54■□□□□ 0.08
CPNE1-220ENST00000458038 DEFB131BA0A096LNP1 70 aa15.53■□□□□ 0.08
CPNE1-220ENST00000458038 AMBPP02760 352 aa15.53■□□□□ 0.08
CPNE1-220ENST00000458038 ZNF182P17025 639 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-220ENST00000458038 SURF2Q15527 256 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-220ENST00000458038 STEAP1BQ6NZ63 245 aa15.53■□□□□ 0.08
CPNE1-220ENST00000458038 OR4D10Q8NGI6 311 aa15.53■□□□□ 0.08
CPNE1-220ENST00000458038 GLYATL2Q8WU03 294 aa15.53■□□□□ 0.08
CPNE1-220ENST00000458038 NRN1Q9NPD7 142 aa15.53■□□□□ 0.08
CPNE1-220ENST00000458038 TEX13DA0A0J9YY54 714 aaPredicted RBP15.52■□□□□ 0.08
CPNE1-220ENST00000458038 FAM90A26D6RGX4 464 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 OR5AC1P0C628 307 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 P0DMU3 169 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 FAM231AP0DMU4 169 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 FAM231CP0DMU5 169 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 MEF2DQ14814 521 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 SLC24A4Q8NFF2 622 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 PFDN2Q9UHV9 154 aa15.52■□□□□ 0.08
CPNE1-220ENST00000458038 CEBPZOSA8MTT3 80 aa15.51■□□□□ 0.07
CPNE1-220ENST00000458038 RD3LP0DJH9 198 aa15.51■□□□□ 0.07
CPNE1-220ENST00000458038 NUP62P37198 522 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-220ENST00000458038 MRPS10P82664 201 aaKnown RBP15.51■□□□□ 0.07
CPNE1-220ENST00000458038 C12orf74Q32Q52 190 aa15.51■□□□□ 0.07
CPNE1-220ENST00000458038 NDUFAF3Q9BU61 184 aa15.51■□□□□ 0.07
CPNE1-220ENST00000458038 H3BMM0 161 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 GABARAPH6UMI1 98 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 BUB3O43684 328 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 GABARAPO95166 117 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 IL4P05112 153 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 SIGLEC15Q6ZMC9 328 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 SELENOHQ8IZQ5 122 aaKnown RBP15.5■□□□□ 0.07
CPNE1-220ENST00000458038 POM121L12Q8N7R1 296 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 NEU1Q99519 415 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 NAA60Q9H7X0 242 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 CACNG5Q9UF02 275 aa15.5■□□□□ 0.07
CPNE1-220ENST00000458038 TMEM189A5PLL7 270 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 SMIM9A6NGZ8 99 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 TOMM40O96008 361 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 USF2Q15853 346 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-220ENST00000458038 GPR107Q5VW38 600 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 NPIPB3Q92617 1050 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 GPR146Q96CH1 333 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 RTBDNQ9BSG5 229 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-220ENST00000458038 XCL2Q9UBD3 114 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 CELA1Q9UNI1 258 aa15.49■□□□□ 0.07
CPNE1-220ENST00000458038 DISC1C4P0D8 188 aa15.48■□□□□ 0.07
CPNE1-220ENST00000458038 HLA-DRB4P13762 266 aa15.48■□□□□ 0.07
CPNE1-220ENST00000458038 NKX2-1P43699 371 aaPredicted RBP15.48■□□□□ 0.07
CPNE1-220ENST00000458038 LHFPL5Q8TAF8 219 aa15.48■□□□□ 0.07
CPNE1-220ENST00000458038 TMEM56-RWDD3S4R434 201 aa15.48■□□□□ 0.07
CPNE1-220ENST00000458038 U3KQ87 197 aa15.48■□□□□ 0.07
CPNE1-220ENST00000458038 HLA-DRB4X5D2U9 266 aa15.48■□□□□ 0.07
CPNE1-220ENST00000458038 CTF1Q16619 201 aa15.47■□□□□ 0.07
CPNE1-220ENST00000458038 TMEM268Q5VZI3 342 aa15.47■□□□□ 0.07
CPNE1-220ENST00000458038 IL22RA2Q969J5 263 aa15.47■□□□□ 0.07
CPNE1-220ENST00000458038 FAM210BQ96KR6 192 aa15.47■□□□□ 0.07
CPNE1-220ENST00000458038 CRYM-AS1A6NIL9 109 aa15.46■□□□□ 0.07
CPNE1-220ENST00000458038 SPART-AS1P0CW21 52 aa15.46■□□□□ 0.07
CPNE1-220ENST00000458038 SULT1A3P0DMM9 295 aa15.46■□□□□ 0.07
CPNE1-220ENST00000458038 SULT1A4P0DMN0 295 aa15.46■□□□□ 0.07
CPNE1-220ENST00000458038 ATP5IP56385 69 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms