RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZNF474Q6S9Z5 364 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 IGFL3Q6UXB1 125 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 RBPMS2Q6ZRY4 209 aaKnown RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 C1orf229Q6ZS94 237 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 NIT1Q86X76 327 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 WFDC8Q8IUA0 241 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 NHLRC2Q8NBF2 726 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ZNF738Q8NE65 137 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 DEFB124Q8NES8 71 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 NUP35Q8NFH5 326 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 NUDT10Q8NFP7 164 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR4F17Q8NGA8 305 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR10W1Q8NGF6 305 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR8B3Q8NGG8 313 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR2T6Q8NHC8 308 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 FAM57AQ8TBR7 257 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ZNF596Q8TC21 504 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ORAOV1Q8WV07 137 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 BLNKQ8WV28 456 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 NPIPB3Q92617 1050 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 MBD6Q96DN6 1003 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ZNF503Q96F45 646 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 NUDT11Q96G61 164 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 FAM167A-AS1Q96KT0 104 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR8B2Q96RD0 313 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 PMCHL2Q9BQD1 86 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 SRSF8Q9BRL6 282 aaKnown RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ALKBH7Q9BT30 221 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 SCNM1Q9BWG6 230 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 SSBP3Q9BWW4 388 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 MAP1LC3CQ9BXW4 147 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 GSX1Q9H4S2 264 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ST20Q9HBF5 79 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ASCL3Q9NQ33 180 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 COLQQ9Y215 455 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 ZNF835Q9Y2P0 537 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 A0A0C4DFX4 3053 aa2.7□□□□□ -1.98
HMGN1P18-201ENST00000457642 KNTC1P50748 2209 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TECTAO75443 2155 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 INTS1Q8N201 2190 aaKnown RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 IGKV1OR2-108A0A075B7D4 117 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 IGHV2-26A0A0B4J1V2 119 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TRAV34A0A0B4J273 112 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 IGHV1-69-2A0A0G2JMI3 117 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TRBV6-1A0A0K0K1D8 114 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 SERTM2A0A1B0GWG4 89 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 A0A1B0GXF2 115 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PSMB11A5LHX3 300 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR4C46A6NHA9 309 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 FBLL1A6NHQ2 334 aaKnown RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 A6NNC1 897 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 SRRM4A7MD48 611 aaKnown RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TMEM178BH3BS89 294 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TCF21O43680 179 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 MOSP00540 346 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 CA1P00915 261 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 LTAP01374 205 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TCRAP04437 139 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 NBEAP1P0C6P0 100 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 CCL3L1P16619 93 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 CD33P20138 364 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TSPOP30536 169 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PLA2G5P39877 138 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 CSN1S1P47710 185 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 REG1BP48304 166 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 HINT1P49773 126 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 ZNF137PP52743 207 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PTTG1IPP53801 180 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PLP1P60201 277 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 LYZP61626 148 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 GNG5P63218 68 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 CCL8P80075 99 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 WT1-ASQ06250 92 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 RBPJQ06330 500 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 SLAQ13239 276 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 MSMPQ1L6U9 139 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 LEMD1Q68G75 181 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 TMEM200BQ69YZ2 307 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PVRIGQ6DKI7 326 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 SLC25A34Q6PIV7 304 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 DUX4L9Q6RFH8 374 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 C12orf54Q6X4T0 127 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 Q6ZS92 163 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 FA2HQ7L5A8 372 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PIP4P1Q86T03 277 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 MOB3BQ86TA1 216 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 Q86TA4 180 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 BPIFA4PQ86YQ2 179 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 SPACA3Q8IXA5 215 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 LYPD1Q8N2G4 141 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 CIARTQ8N365 385 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 FAM19A2Q8N3H0 131 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 OR4C5Q8NGB2 326 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 C8orf46Q8TAG6 207 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 RPEQ96AT9 228 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 FXYD5Q96DB9 178 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 PGLYRP4Q96LB8 373 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 RCHY1Q96PM5 261 aa2.69□□□□□ -1.98
HMGN1P18-201ENST00000457642 RNF5Q99942 180 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms