RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CRISP2P16562 243 aa14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 CENPWQ5EE01 88 aa14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 TMEM68Q96MH6 324 aa14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 MRPL36Q9P0J6 103 aaKnown RBP14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 IGHV2-26A0A0B4J1V2 119 aa14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 IGHV3-72A0A0B4J1Y9 119 aa14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 TCRBV4S1A1TA0A5B7 111 aa14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 SLC17A3O00476 420 aa14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 SIAH2O43255 324 aa14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 ENSAO43768 121 aaKnown RBP14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 GNG4P50150 75 aa14.77□□□□□ -0.05
SEMA3B-209ENST00000456560 POLEQ07864 2286 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 IGLC7A0M8Q6 106 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 M0QZK8 103 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 SERF1AO75920 110 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 CA7P43166 264 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 LY6DQ14210 128 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 PATE2Q6UY27 113 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 HSPB9Q9BQS6 159 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 V9GYV3 84 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 RELNP78509 3460 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 CRYGCP07315 174 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 PRRX1P54821 245 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 LINC00310P59036 64 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 SUMO1P63165 101 aaKnown RBP14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 OR5I1Q13606 314 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 MUC15Q8N387 334 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 OR1L6Q8NGR2 347 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 PRORYQ9H606 182 aa14.76□□□□□ -0.05
SEMA3B-209ENST00000456560 GRNP28799 593 aaKnown RBP14.75□□□□□ -0.05
SEMA3B-209ENST00000456560 DLX1P56177 255 aa14.75□□□□□ -0.05
SEMA3B-209ENST00000456560 LGALS4P56470 323 aa14.75□□□□□ -0.05
SEMA3B-209ENST00000456560 BAGE3Q86Y29 109 aa14.75□□□□□ -0.05
SEMA3B-209ENST00000456560 BAGE2Q86Y30 109 aa14.75□□□□□ -0.05
SEMA3B-209ENST00000456560 OR1L4Q8NGR5 311 aa14.75□□□□□ -0.05
SEMA3B-209ENST00000456560 FAM90A27PA6NNH2 459 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 IGHV3-48P01763 117 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 RPLP1P05386 114 aaKnown RBP14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 REG1AP05451 166 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 RANP62826 216 aaKnown RBP14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 TDRG1Q3Y452 100 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 TPTE2P1Q5T6R2 138 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 C10orf113Q5VZT2 155 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 TEX43Q6ZNM6 134 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 MMD2Q8IY49 270 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 OR5AU1Q8NGC0 362 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 C20orf144Q9BQM9 153 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 MIEN1Q9BRT3 115 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 FCN1O00602 326 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 COX7A2P2O60397 106 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 IGLV2-8P01709 118 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 ESDP10768 282 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 MFAP2P55001 183 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 IGF2BP2-AS1Q96M15 143 aa14.74□□□□□ -0.05
SEMA3B-209ENST00000456560 IGHV1-3A0A0C4DH29 117 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 BUB1B-PAK6H3BSN5 160 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 CNTFRP26992 372 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 CDKN1AP38936 164 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 IER3P46695 156 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 UBE2L3P68036 154 aaKnown RBP14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 RPEL1Q2QD12 228 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 ZNF672Q499Z4 452 aaPredicted RBP14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 CLEC7AQ9BXN2 247 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 OSTCQ9NRP0 149 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 ZNF355PQ9NSJ1 428 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 RBP4P02753 201 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 TMEM183BQ1AE95 376 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 RUSC1-AS1Q66K80 236 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 CYB5R2Q6BCY4 276 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 MRPL52Q86TS9 123 aaKnown RBP14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 VN1R17PQ8TDU5 208 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 SAMD10Q9BYL1 202 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 SIGLEC9Q9Y336 463 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 PAM16Q9Y3D7 125 aa14.73□□□□□ -0.05
SEMA3B-209ENST00000456560 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 C22orf46C9J442 243 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 RPL27AP46776 148 aaKnown RBP14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 BPIFB3P59826 476 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 PRB3Q04118 309 aaPredicted RBP14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 TIGITQ495A1 244 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 ETFRF1Q6IPR1 90 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 C8orf46Q8TAG6 207 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 VAMP8Q9BV40 100 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 KALRNO60229 2985 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 A6NNC1 897 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 SNURFLB1AK76 121 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 F2Z2F3 143 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 PAXXQ9BUH6 204 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 INSIG2Q9Y5U4 225 aa14.72□□□□□ -0.05
SEMA3B-209ENST00000456560 PPIAL4CA0A0B4J2A2 164 aa14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 CCL21O00585 134 aa14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 PPIAL4GP0DN37 164 aa14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 PYYP10082 97 aa14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 COMPP49747 757 aaPredicted RBP14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 TNXAQ16473 311 aa14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 HCP5Q6MZN7 132 aa14.71□□□□□ -0.05
SEMA3B-209ENST00000456560 ISLRO14498 428 aa14.7□□□□□ -0.06
SEMA3B-209ENST00000456560 FRMD6-AS1P0C7T7 363 aa14.7□□□□□ -0.06
SEMA3B-209ENST00000456560 PAX2Q02962 417 aa14.7□□□□□ -0.06
SEMA3B-209ENST00000456560 FXYD5Q96DB9 178 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms