RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 OR1S2Q8NGQ3 325 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 NARS2Q96I59 477 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 CIB3Q96Q77 187 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 RNF2Q99496 336 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 TMEM231Q9H6L2 316 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 IGKV3-7A0A075B6H7 116 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 A0A1W2PS18 150 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 WRBO00258 174 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 OR10J1P30954 320 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 PAFAH1B2P68402 229 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 HAGHQ16775 308 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 NPIPB3Q92617 1050 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 METTL26Q96S19 204 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 MAGT1Q9H0U3 335 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 WFDC10AQ9H1F0 79 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 C20orf85Q9H1P6 137 aa13.55□□□□□ -0.24
PDLIM2-215ENST00000456545 SYNGR2O43760 224 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 ADAP1O75689 374 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 TCRBP04435 133 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 CD5P06127 495 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 TFPI2P48307 235 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 MZT2BQ6NZ67 158 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 SLC35E1Q96K37 410 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 SPATA25Q9BR10 227 aa13.54□□□□□ -0.24
PDLIM2-215ENST00000456545 TRAV6A0A075B6T7 132 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 FAM240BA0A1B0GVZ2 78 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 GPX4P36969 197 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 TCF24Q7RTU0 167 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 PTTG2Q9NZH5 202 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 UBQLN2Q9UHD9 624 aa13.53□□□□□ -0.24
PDLIM2-215ENST00000456545 DNASE2O00115 360 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 IGKV1-17P01599 117 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 IGLC1P0CG04 106 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 CMC4P56277 68 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 YPEL3P61236 119 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 WFDC3Q8IUB2 231 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 GBGT1Q8N5D6 347 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 ST8SIA2Q92186 375 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 GRAMD2BQ96HH9 432 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 ZNF414Q96IQ9 312 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 TM2D3Q9BRN9 247 aa13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 WDR12Q9GZL7 423 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-215ENST00000456545 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 ZFP92A6NM28 416 aa13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 APOHP02749 345 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 RD3LP0DJH9 198 aa13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 SPANXN5Q5MJ07 72 aa13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 NUDT15Q9NV35 164 aa13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 GSKIPQ9P0R6 139 aa13.51□□□□□ -0.25
PDLIM2-215ENST00000456545 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 LOC102724200A0A096LPH7 203 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 DFFBO76075 338 aa13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 H2AFB2P0C5Z0 115 aa13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 MITD1Q8WV92 249 aa13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 VSIRQ9H7M9 311 aa13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 STRAPQ9Y3F4 350 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-215ENST00000456545 MPTX1A8MV57 137 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 IL4P05112 153 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 FABP1P07148 127 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 EIF2B2P49770 351 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 POLR2GP62487 172 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 ID3Q02535 119 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 GAMTQ14353 236 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 LINC00322Q6ZN03 302 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 GGTLC1Q9BX51 225 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 PSENENQ9NZ42 101 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 DNAH9Q9NYC9 4486 aa13.49□□□□□ -0.25
PDLIM2-215ENST00000456545 FAM25EA8MYX2 175 aa13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 TOMM40O96008 361 aa13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 HNRNPCP07910 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 CRYBB3P26998 211 aa13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 FAM90A2PQ658T7 463 aa13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 PFDN2Q9UHV9 154 aa13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 RABAC1Q9UI14 185 aa13.48□□□□□ -0.25
PDLIM2-215ENST00000456545 H3BP45 60 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 SSSCA1O60232 199 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 PSG1P11464 419 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 P2RY1P47900 373 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 LILRB2Q8N423 598 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 OR51G1Q8NGK1 321 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 ENKURQ8TC29 256 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 ZNF431Q8TF32 576 aaPredicted RBP13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 PBDC1Q9BVG4 233 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 MS4A6AQ9H2W1 248 aa13.47□□□□□ -0.25
PDLIM2-215ENST00000456545 C5orf51A6NDU8 294 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 UPK1BO75841 260 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 APOC4P55056 127 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 ASAH1Q13510 395 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 C12orf45Q8N5I9 185 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms