RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 GPX1P07203 203 aa8.25□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RELBQ01201 579 aa8.25□□□□□ -1.09
CSGALNACT1-203ENST00000454498 LEMD1Q68G75 181 aa8.25□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TBX15Q96SF7 602 aa8.25□□□□□ -1.09
CSGALNACT1-203ENST00000454498 LIME1Q9H400 295 aa8.25□□□□□ -1.09
CSGALNACT1-203ENST00000454498 GRIFINA4D1Z8 144 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 HLA-DRB1P01911 266 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 PYYP10082 97 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RPS20P60866 119 aaKnown RBP8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 ERVK11-1P61568 191 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RHOGP84095 191 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 HIST1H1AQ02539 215 aaPredicted RBP8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TMEM167AQ8TBQ9 72 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RNF125Q96EQ8 232 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 PHLDA3Q9Y5J5 127 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RNF151Q2KHN1 245 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 ANAPC10Q9UM13 185 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 H0YJW9 148 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 WNT2P09544 360 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 MYOD1P15172 320 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 K7EM74 188 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 IGKV1-16P04430 117 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 GATA4P43694 442 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TAS2R60P59551 318 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 COTL1Q14019 142 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 C2orf83Q53S99 150 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 PVRIGQ6DKI7 326 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 VMO1Q7Z5L0 202 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 GPR82Q96P67 336 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 Q9H3A6 140 aa8.24□□□□□ -1.09
CSGALNACT1-203ENST00000454498 A0A1W2PRE2 83 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 DDB2Q92466 427 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 SPRY4Q9C004 299 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 LINC00527Q9UJ94 153 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 CDX1P47902 265 aaPredicted RBP8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TPTE2P1Q5T6R2 138 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RNF166Q96A37 237 aaPredicted RBP8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 CDC42EP3Q9UKI2 254 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 ABCA2Q9BZC7 2435 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 A0A087WWC5 75 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 M0QZK8 103 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 CD5P06127 495 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 FOXA3P55318 350 aaPredicted RBP8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 C3orf36Q3SXR2 165 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 MYOZ3Q8TDC0 251 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 IL36BQ9NZH7 164 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 COL4A3Q01955 1670 aa8.23□□□□□ -1.09
CSGALNACT1-203ENST00000454498 ANKRD11Q6UB99 2663 aaPredicted RBP8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 SPTBN4Q9H254 2564 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 WIPF3A6NGB9 483 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 FAM53AQ6NSI3 398 aaPredicted RBP8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 IGFL2Q6UWQ7 119 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 BPESC1Q9GZL8 116 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 ZNRD1Q9P1U0 126 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TNCP24821 2201 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 IGLV3-9A0A075B6K5 115 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 C15orf62A8K5M9 175 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 C1QTNF9P0C862 333 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 CFHR2P36980 270 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 NPFFR1Q9GZQ6 430 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 IGHV3OR16-12A0A075B7B8 117 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TRBV9A0A0B4J1U6 114 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 OOSP1A8MZH6 123 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 STAG3L2P0CL84 134 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 STAG3L3P0CL85 134 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 HBBP68871 147 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TUBA4BQ9H853 241 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 C5orf42Q9H799 3197 aa8.22□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TRAV1-1A0A0B4J248 108 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 BUB1B-PAK6H3BSN5 160 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 KLF17Q5JT82 389 aaPredicted RBP8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 MINOS1Q5TGZ0 78 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 MINOS1-NBL1R4GNA1 71 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 ITGB1BP1O14713 200 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 LYL1P12980 280 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 GNG5P63218 68 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TCF24Q7RTU0 167 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 TMEM219Q86XT9 240 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 RNF5Q99942 180 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 SIGLEC9Q9Y336 463 aa8.21□□□□□ -1.09
CSGALNACT1-203ENST00000454498 COL4A4P53420 1690 aaPredicted RBP8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 TSPOP30536 169 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 C5orf64Q2M2E5 130 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 TMEM155Q4W5P6 130 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 DUX4L9Q6RFH8 374 aaPredicted RBP8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 ZNF841Q6ZN19 808 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 ZNF106Q9H2Y7 1883 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 XIRP2A4UGR9 3374 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 M0R143 59 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 M0R1W7 72 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 PRTN3P24158 256 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 TMEM97Q5BJF2 176 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 BRD3OSQ6XYD6 125 aa8.21□□□□□ -1.1
CSGALNACT1-203ENST00000454498 SEPSECSQ9HD40 501 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms