RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ACY3Q96HD9 319 aa21.18■□□□□ 0.98
SMARCC1-203ENST00000454240 C20orf24Q9BUV8 137 aa21.18■□□□□ 0.98
SMARCC1-203ENST00000454240 TECRQ9NZ01 308 aaKnown RBP21.18■□□□□ 0.98
SMARCC1-203ENST00000454240 IGHV3OR16-8A0A075B7F1 116 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 K7EIL1 84 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 K7EPK0 472 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 YIF1AO95070 293 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 GAMTQ14353 236 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 TIGITQ495A1 244 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 TOMM20LQ6UXN7 152 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 OR1S2Q8NGQ3 325 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 DYNLRB2Q8TF09 96 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 PRR25Q96S07 402 aa21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 PUS1Q9Y606 427 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMARCC1-203ENST00000454240 GOSR2O14653 212 aa21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 TSC22D2O75157 780 aa21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 OR10J1P30954 320 aa21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 CD300EQ496F6 205 aaPredicted RBP21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 TMEM14EPQ6UXP3 125 aa21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 ZFAND3Q9H8U3 227 aa21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 MLXQ9UH92 298 aa21.16■□□□□ 0.98
SMARCC1-203ENST00000454240 PMS2P5A8MQ11 134 aa21.15■□□□□ 0.98
SMARCC1-203ENST00000454240 SIX6O95475 246 aa21.15■□□□□ 0.98
SMARCC1-203ENST00000454240 GP9P14770 177 aa21.15■□□□□ 0.98
SMARCC1-203ENST00000454240 SLC35E1Q96K37 410 aa21.15■□□□□ 0.98
SMARCC1-203ENST00000454240 C11orf1Q9H5F2 150 aa21.15■□□□□ 0.98
SMARCC1-203ENST00000454240 LSM5Q9Y4Y9 91 aaKnown RBP21.15■□□□□ 0.98
SMARCC1-203ENST00000454240 PRKDCP78527 4128 aaKnown RBP21.14■□□□□ 0.98
SMARCC1-203ENST00000454240 IZUMO1RA6ND01 250 aa21.14■□□□□ 0.97
SMARCC1-203ENST00000454240 ZNF207O43670 478 aaKnown RBP21.14■□□□□ 0.97
SMARCC1-203ENST00000454240 YPEL3P61236 119 aaPredicted RBP21.14■□□□□ 0.97
SMARCC1-203ENST00000454240 LCN12Q6JVE5 192 aa21.14■□□□□ 0.97
SMARCC1-203ENST00000454240 SSNA1O43805 119 aa21.13■□□□□ 0.97
SMARCC1-203ENST00000454240 RAB32Q13637 225 aa21.13■□□□□ 0.97
SMARCC1-203ENST00000454240 RGS21Q2M5E4 152 aa21.13■□□□□ 0.97
SMARCC1-203ENST00000454240 MRAPQ8TCY5 172 aa21.13■□□□□ 0.97
SMARCC1-203ENST00000454240 NMES1Q9C002 83 aa21.13■□□□□ 0.97
SMARCC1-203ENST00000454240 ALG5Q9Y673 324 aa21.13■□□□□ 0.97
SMARCC1-203ENST00000454240 BTNL8Q6UX41 500 aa21.12■□□□□ 0.97
SMARCC1-203ENST00000454240 SMPXQ9UHP9 88 aa21.12■□□□□ 0.97
SMARCC1-203ENST00000454240 IGKV1D-37A0A075B6S9 117 aa21.11■□□□□ 0.97
SMARCC1-203ENST00000454240 TRAV14DV4A0A0A6YYC5 116 aa21.11■□□□□ 0.97
SMARCC1-203ENST00000454240 L7N2F9 121 aa21.11■□□□□ 0.97
SMARCC1-203ENST00000454240 H2BFSP57053 126 aa21.11■□□□□ 0.97
SMARCC1-203ENST00000454240 VAMP2P63027 116 aa21.11■□□□□ 0.97
SMARCC1-203ENST00000454240 GINS3Q9BRX5 216 aa21.11■□□□□ 0.97
SMARCC1-203ENST00000454240 IGHV7-4-1A0A0J9YVY3 117 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 ZNF785A8K8V0 405 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 CCNKO75909 580 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 METTL15P1P0C7V9 234 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 OR8G2PQ6IF36 304 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 Q8WTZ3 238 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 SELENOKQ9Y6D0 94 aa21.1■□□□□ 0.97
SMARCC1-203ENST00000454240 SCAF4O95104 1147 aaKnown RBP21.09■□□□□ 0.97
SMARCC1-203ENST00000454240 TOMM40O96008 361 aa21.09■□□□□ 0.97
SMARCC1-203ENST00000454240 S100A10P60903 97 aa21.09■□□□□ 0.97
SMARCC1-203ENST00000454240 CYCSP99999 105 aaKnown RBP21.09■□□□□ 0.97
SMARCC1-203ENST00000454240 THAP8Q8NA92 274 aa21.09■□□□□ 0.97
SMARCC1-203ENST00000454240 LSM4Q9Y4Z0 139 aaKnown RBP21.09■□□□□ 0.97
SMARCC1-203ENST00000454240 IGKV1OR2-108A0A075B7D4 117 aa21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 ZFP92A6NM28 416 aa21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 PVALBP20472 110 aaPredicted RBP21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 OXA1LQ15070 435 aa21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 ACOT7LQ6ZUV0 252 aa21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 TMEM61Q8N0U2 210 aa21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 MGAT4CQ9UBM8 478 aa21.08■□□□□ 0.97
SMARCC1-203ENST00000454240 CHEK1O14757 476 aa21.07■□□□□ 0.96
SMARCC1-203ENST00000454240 RD3LP0DJH9 198 aa21.07■□□□□ 0.96
SMARCC1-203ENST00000454240 OR10P1Q8NGE3 313 aa21.07■□□□□ 0.96
SMARCC1-203ENST00000454240 WDR89Q96FK6 387 aaPredicted RBP21.07■□□□□ 0.96
SMARCC1-203ENST00000454240 TRGV9Q99603 122 aa21.07■□□□□ 0.96
SMARCC1-203ENST00000454240 RHPN1-AS1Q9BWJ2 59 aa21.07■□□□□ 0.96
SMARCC1-203ENST00000454240 TRAV25A0A0B4J276 109 aa21.06■□□□□ 0.96
SMARCC1-203ENST00000454240 PSG1P11464 419 aa21.06■□□□□ 0.96
SMARCC1-203ENST00000454240 DLK1P80370 383 aa21.06■□□□□ 0.96
SMARCC1-203ENST00000454240 ARL16Q0P5N6 197 aa21.06■□□□□ 0.96
SMARCC1-203ENST00000454240 IGHV3-49A0A0A0MS15 119 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 FNDC10F2Z333 226 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 DEDDO75618 318 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 NPPCP23582 126 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 BCAP31P51572 246 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 ZNF90Q03938 601 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 DEFB121Q5J5C9 76 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 TMEM144Q7Z5S9 345 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 Q8N1Y9 231 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 VSIRQ9H7M9 311 aa21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 LYRM2Q9NU23 88 aaPredicted RBP21.05■□□□□ 0.96
SMARCC1-203ENST00000454240 FAM24AA6NFZ4 105 aa21.04■□□□□ 0.96
SMARCC1-203ENST00000454240 APOHP02749 345 aaPredicted RBP21.04■□□□□ 0.96
SMARCC1-203ENST00000454240 CRYBB3P26998 211 aa21.04■□□□□ 0.96
SMARCC1-203ENST00000454240 CAV2P51636 162 aa21.04■□□□□ 0.96
SMARCC1-203ENST00000454240 METTL26Q96S19 204 aa21.04■□□□□ 0.96
SMARCC1-203ENST00000454240 IL4P05112 153 aa21.03■□□□□ 0.96
SMARCC1-203ENST00000454240 AKR1C1Q04828 323 aa21.03■□□□□ 0.96
SMARCC1-203ENST00000454240 RBPMS2Q6ZRY4 209 aaKnown RBP21.03■□□□□ 0.96
SMARCC1-203ENST00000454240 OR51G1Q8NGK1 321 aa21.03■□□□□ 0.96
SMARCC1-203ENST00000454240 RNF2Q99496 336 aa21.03■□□□□ 0.96
SMARCC1-203ENST00000454240 GGACTQ9BVM4 153 aa21.03■□□□□ 0.96
SMARCC1-203ENST00000454240 IGHV3OR16-13A0A075B7E8 117 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 IGHV3-74A0A0B4J1X5 117 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms