RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SPANXN5Q5MJ07 72 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 C9orf66Q5T8R8 295 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 SLC16A13Q7RTY0 426 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 OR1S2Q8NGQ3 325 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 SLC35E1Q96K37 410 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 GGACTQ9BVM4 153 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 ZNF436Q9C0F3 470 aaPredicted RBP6.68□□□□□ -1.34
COL28A1-205ENST00000453441 SIGLEC8Q9NYZ4 499 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 RCL1Q9Y2P8 373 aaKnown RBP6.68□□□□□ -1.34
COL28A1-205ENST00000453441 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 OR2T8A6NH00 312 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 A8MWP6 167 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 E5RGE8 158 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 NPIPB6E9PJ23 425 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 IGHV3-23P01764 117 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 SLURP1P55000 103 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 S100A10P60903 97 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 RRAS2P62070 204 aaPredicted RBP6.67□□□□□ -1.34
COL28A1-205ENST00000453441 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
COL28A1-205ENST00000453441 TMEM14EPQ6UXP3 125 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 UBAC2Q8NBM4 344 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 OR10P1Q8NGE3 313 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 OR9G4Q8NGQ1 327 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 TMEM170AQ8WVE7 144 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 DLX4Q92988 240 aaPredicted RBP6.67□□□□□ -1.34
COL28A1-205ENST00000453441 MARC2Q969Z3 335 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 DUX3Q96PT4 197 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 OR4C12Q96R67 309 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 FNDC4Q9H6D8 234 aaPredicted RBP6.67□□□□□ -1.34
COL28A1-205ENST00000453441 LYRM2Q9NU23 88 aaPredicted RBP6.67□□□□□ -1.34
COL28A1-205ENST00000453441 UFC1Q9Y3C8 167 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 LSM5Q9Y4Y9 91 aaKnown RBP6.67□□□□□ -1.34
COL28A1-205ENST00000453441 CMYA5Q8N3K9 4069 aa6.67□□□□□ -1.34
COL28A1-205ENST00000453441 SEC14L6B5MCN3 397 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 K7EMT4 169 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 DEDDO75618 318 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 TMEM50AO95807 157 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 CFDP00746 253 aaPredicted RBP6.66□□□□□ -1.34
COL28A1-205ENST00000453441 CTSGP08311 255 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 BMI1P35226 326 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 RND2P52198 227 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 PAX9P55771 341 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 H2BFSP57053 126 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 SYNJ2BPP57105 145 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 YPEL3P61236 119 aaPredicted RBP6.66□□□□□ -1.34
COL28A1-205ENST00000453441 HBG1P69891 147 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 HBG2P69892 147 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 DLK1P80370 383 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 FGL1Q08830 312 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 RAB32Q13637 225 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 KIR3DS1Q14943 382 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 PRSS54Q6PEW0 395 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 ZNF600Q6ZNG1 722 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 STX12Q86Y82 276 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 PPP1R1CQ8WVI7 109 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 TMEM190Q8WZ59 177 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 GINS3Q9BRX5 216 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 SLC25A31Q9H0C2 315 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 PAIP2BQ9ULR5 123 aaKnown RBP6.66□□□□□ -1.34
COL28A1-205ENST00000453441 S4R3C0 116 aa6.66□□□□□ -1.34
COL28A1-205ENST00000453441 IGHV3-21A0A0B4J1V1 117 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 PRSS46E5RG02 174 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 H3BP45 60 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 OR2C1O95371 312 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 SIX6O95475 246 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 GIPP09681 153 aaPredicted RBP6.65□□□□□ -1.34
COL28A1-205ENST00000453441 IGLC1P0CG04 106 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 OR10J1P30954 320 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 S100A7P31151 101 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 P2RY1P47900 373 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 SULT1A1P50225 295 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 BCAP31P51572 246 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 CAV2P51636 162 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 LINC00310P59036 64 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 RAP2BP61225 183 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 BAXQ07812 192 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 OR2K2Q8NGT1 345 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 Q8WTZ3 238 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 ACY3Q96HD9 319 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 C11orf1Q9H5F2 150 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 DAZ1Q9NQZ3 744 aaKnown RBP6.65□□□□□ -1.34
COL28A1-205ENST00000453441 TECRQ9NZ01 308 aaKnown RBP6.65□□□□□ -1.34
COL28A1-205ENST00000453441 MRPL27Q9P0M9 148 aaKnown RBP6.65□□□□□ -1.34
COL28A1-205ENST00000453441 PFDN2Q9UHV9 154 aa6.65□□□□□ -1.34
COL28A1-205ENST00000453441 ZNF320A2RRD8 509 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 PMS2P5A8MQ11 134 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 MPC2O95563 127 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 CD5P06127 495 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 METTL15P1P0C7V9 234 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 IGLL1P15814 213 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 S100A11P31949 105 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 NUP62P37198 522 aaPredicted RBP6.64□□□□□ -1.35
COL28A1-205ENST00000453441 AKR1C1Q04828 323 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 GAMTQ14353 236 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 FCN2Q15485 313 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 ATP6V1FQ16864 119 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 KPRPQ5T749 579 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms