RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 TCRBV4S1A1TA0A5B7 111 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 UMAD1C9J7I0 102 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 MBP02144 154 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RAB5CP51148 216 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ALKAL2Q6UX46 152 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CYP2G1PQ6ZSU1 146 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 KLHDC1Q8N7A1 406 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 OR5AU1Q8NGC0 362 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 LINC01006Q8NI28 216 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 MGST2Q99735 147 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZFHX3Q15911 3703 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 IGKV1OR2-108A0A075B7D4 117 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 A0A1B0GUS0 222 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 NUPL2O15504 423 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 TSPAN15O95858 294 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CLEC3BP05452 202 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 IGLC1P0CG04 106 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 YPEL3P61236 119 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SPSB3Q6PJ21 355 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 Q6ZRG5 221 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 LRRC20Q8TCA0 184 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RNF141Q8WVD5 230 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SH3BGRL3Q9H299 93 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 S4R3C0 116 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 NF1P21359 2839 aa9.74□□□□□ -0.85
HLA-DPA1-244ENST00000453337 IGKV1D-37A0A075B6S9 117 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CLPSL1A2RUU4 121 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 OR2T8A6NH00 312 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 IGHV3-23P01764 117 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RD3LP0DJH9 198 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SULT1A2P50226 295 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 DEFA5Q01523 94 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZNF616Q08AN1 781 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ACOT6Q3I5F7 207 aaPredicted RBP9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 FFAR4Q5NUL3 377 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 MIC13Q5XKP0 118 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZNF343Q6P1L6 599 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CLEC19AQ6UXS0 136 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 BPIFCQ8NFQ6 507 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 OR4X2Q8NGF9 303 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 Q8WTZ3 238 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 UBE2E2Q96LR5 201 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RNF114Q9Y508 228 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RFNGQ9Y644 331 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PXMP4Q9Y6I8 212 aa9.73□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RGS13O14921 159 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RPLP1P05386 114 aaKnown RBP9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CTSGP08311 255 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 LINC00869P0C866 280 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RAB14P61106 215 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 B2MP61769 119 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PRR20EP86478 221 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PRR20CP86479 221 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PRR20DP86480 221 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PRR20BP86481 221 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PRR20AP86496 221 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZNF90Q03938 601 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 KIAA0141Q14154 515 aaPredicted RBP9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 TIGITQ495A1 244 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 DPPA3Q6W0C5 159 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 TMEM182Q6ZP80 229 aaPredicted RBP9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 STPG3Q8N7X2 389 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 MYOZ3Q8TDC0 251 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 C19orf24Q9BVV8 132 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SLC39A9Q9NUM3 307 aa9.72□□□□□ -0.85
HLA-DPA1-244ENST00000453337 TGOLN2O43493 480 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TOMM40O96008 361 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 M6PRP20645 277 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GPR183P32249 361 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 BLOC1S1P78537 153 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ZNF600Q6ZNG1 722 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 LCNL1Q6ZST4 164 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 SAT2Q96F10 170 aaPredicted RBP9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CCDC140Q96MF4 163 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 DNAJC4Q9NNZ3 241 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PEF1Q9UBV8 284 aaKnown RBP9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 MAST4O15021 2626 aa9.71□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 IGHV3-11P01762 117 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PSG1P11464 419 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GATA2P23769 480 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ARL3P36405 182 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CDX1P47902 265 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PLP1P60201 277 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 FOXL1Q12952 345 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms