RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CCSO14618 274 aa15.03■□□□□ -0
COL9A3-202ENST00000452372 ZNF207O43670 478 aaKnown RBP15.03■□□□□ -0
COL9A3-202ENST00000452372 IGLC1P0CG04 106 aa15.03■□□□□ -0
COL9A3-202ENST00000452372 BTNL8Q6UX41 500 aa15.03■□□□□ -0
COL9A3-202ENST00000452372 SLC16A13Q7RTY0 426 aa15.03■□□□□ -0
COL9A3-202ENST00000452372 OR1S2Q8NGQ3 325 aa15.03■□□□□ -0
COL9A3-202ENST00000452372 NPIPB3Q92617 1050 aa15.03■□□□□ -0
COL9A3-202ENST00000452372 GPN1Q9HCN4 374 aaPredicted RBP15.03■□□□□ -0
COL9A3-202ENST00000452372 PUS1Q9Y606 427 aaKnown RBP eCLIP15.03■□□□□ -0
COL9A3-202ENST00000452372 TRAV14DV4A0A0A6YYC5 116 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 PRAF2O60831 178 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 OR10J1P30954 320 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 TIGITQ495A1 244 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 SPANXN5Q5MJ07 72 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 Q8N1Y9 231 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 ACY3Q96HD9 319 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 SMIM8Q96KF7 97 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 WWC2-AS2Q96NR7 200 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 ZFAND3Q9H8U3 227 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 SMPXQ9UHP9 88 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 PAIP2BQ9ULR5 123 aaKnown RBP15.02■□□□□ -0
COL9A3-202ENST00000452372 SMAD5-AS1Q9Y6J3 95 aa15.02■□□□□ -0
COL9A3-202ENST00000452372 DNAH7Q8WXX0 4024 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 TRAV25A0A0B4J276 109 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 IGHV7-4-1A0A0J9YVY3 117 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 SNRPGP15A8MWD9 76 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 FAM25EA8MYX2 175 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 SSSCA1O60232 199 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 YPEL3P61236 119 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-202ENST00000452372 GAMTQ14353 236 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 TMEM61Q8N0U2 210 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 GINS3Q9BRX5 216 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 PSENENQ9NZ42 101 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 STRAPQ9Y3F4 350 aaKnown RBP15.01□□□□□ -0.01
COL9A3-202ENST00000452372 SELENOKQ9Y6D0 94 aa15.01□□□□□ -0.01
COL9A3-202ENST00000452372 C5orf51A6NDU8 294 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 H3BP45 60 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 SCGB1D2O95969 90 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 MBPP02686 304 aaPredicted RBP15□□□□□ -0.01
COL9A3-202ENST00000452372 PAX9P55771 341 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 WDR89Q96FK6 387 aaPredicted RBP15□□□□□ -0.01
COL9A3-202ENST00000452372 SLC35E1Q96K37 410 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 C2orf50Q96LR7 162 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 RAB40CQ96S21 281 aa15□□□□□ -0.01
COL9A3-202ENST00000452372 PRSS46E5RG02 174 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 NHLRC4P0CG21 123 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-202ENST00000452372 TAS2R30P59541 319 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 GUCA2BQ16661 112 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 GSG1LQ6UXU4 331 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 RBPMS2Q6ZRY4 209 aaKnown RBP14.99□□□□□ -0.01
COL9A3-202ENST00000452372 GTSCR1Q86UQ5 136 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 Q8WTZ3 238 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 RHPN1-AS1Q9BWJ2 59 aa14.99□□□□□ -0.01
COL9A3-202ENST00000452372 RCL1Q9Y2P8 373 aaKnown RBP14.99□□□□□ -0.01
COL9A3-202ENST00000452372 CHEK1O14757 476 aa14.98□□□□□ -0.01
COL9A3-202ENST00000452372 LAMTOR1Q6IAA8 161 aa14.98□□□□□ -0.01
COL9A3-202ENST00000452372 SCAF4O95104 1147 aaKnown RBP14.97□□□□□ -0.01
COL9A3-202ENST00000452372 IL15RAQ13261 267 aa14.97□□□□□ -0.01
COL9A3-202ENST00000452372 TMEM14EPQ6UXP3 125 aa14.97□□□□□ -0.01
COL9A3-202ENST00000452372 IGHV3-49A0A0A0MS15 119 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 C7orf66A4D0T2 115 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 PMS2P5A8MQ11 134 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 TSPAN4O14817 238 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 TSC22D2O75157 780 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 TOMM40O96008 361 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 RD3LP0DJH9 198 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 NPPCP23582 126 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 CD81P60033 236 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 RNF2Q99496 336 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 NEURL2Q9BR09 285 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 VSIRQ9H7M9 311 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 U3KQK5 164 aa14.96□□□□□ -0.01
COL9A3-202ENST00000452372 IGKV1D-37A0A075B6S9 117 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 ZFP92A6NM28 416 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 A8MZ25 164 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 APOHP02749 345 aaPredicted RBP14.95□□□□□ -0.02
COL9A3-202ENST00000452372 CRYBB3P26998 211 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 BMI1P35226 326 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 METTL26Q96S19 204 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 ASCL2Q99929 193 aa14.95□□□□□ -0.02
COL9A3-202ENST00000452372 SPAG8Q99932 426 aaPredicted RBP14.95□□□□□ -0.02
COL9A3-202ENST00000452372 IGHV3OR16-13A0A075B7E8 117 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 IGHV3-74A0A0B4J1X5 117 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 K7EPK0 472 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 PTTG1O95997 202 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 CD7P09564 240 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 IGHV4-30-4P0DP06 118 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 PSG1P11464 419 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 OR8G2PQ6IF36 304 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 THAP8Q8NA92 274 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 ST8SIA2Q92186 375 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 TRGV9Q99603 122 aa14.94□□□□□ -0.02
COL9A3-202ENST00000452372 LSM5Q9Y4Y9 91 aaKnown RBP14.94□□□□□ -0.02
COL9A3-202ENST00000452372 DYNC2H1Q8NCM8 4307 aaKnown RBP14.94□□□□□ -0.02
COL9A3-202ENST00000452372 IGKV1OR2-108A0A075B7D4 117 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 A0A1W2PS18 150 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 L7N2F9 121 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 IL4P05112 153 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 CD5P06127 495 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 METTL15P1P0C7V9 234 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms