RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SULT1A4P0DMN0 295 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-208ENST00000452047 NPPCP23582 126 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 KLF9Q13886 244 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-208ENST00000452047 TIGITQ495A1 244 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 PRSS54Q6PEW0 395 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 FAM24BQ8N5W8 94 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 SCGB3A2Q96PL1 93 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 METTL26Q96S19 204 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 TMEM231Q9H6L2 316 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 KCNIP3Q9Y2W7 256 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 V9GYH0 126 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 TRAV30A0A087WSZ9 112 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 SCGB2A1O75556 95 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 NXPH3O95157 252 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 SLC25A4P12235 298 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 AKR1C4P17516 323 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 NPY1RP25929 384 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 RND2P52198 227 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 ZNF79Q15937 498 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 Q6ZNX1 250 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 LYZL2Q7Z4W2 148 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 OR1S2Q8NGQ3 325 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 HSPB7Q9UBY9 170 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 CACFD1Q9UGQ2 172 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 U3KQE9 123 aa9.16□□□□□ -0.94
CPSF4-208ENST00000452047 A0A1W2PS18 150 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 K7EQG2 157 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 DNASE2O00115 360 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-208ENST00000452047 OR10J1P30954 320 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 P2RY1P47900 373 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 CCR6P51684 374 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 DEFB131AP59861 70 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 YPEL3P61236 119 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-208ENST00000452047 RPL11P62913 178 aaKnown RBP9.15□□□□□ -0.94
CPSF4-208ENST00000452047 PMS2P11Q13670 270 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 SMCO1Q147U7 214 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
CPSF4-208ENST00000452047 AGRNO00468 2067 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 CXorf65A6NEN9 183 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 FAUP35544 74 aaKnown RBP9.14□□□□□ -0.95
CPSF4-208ENST00000452047 SRPXP78539 464 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
CPSF4-208ENST00000452047 NOXA1Q86UR1 476 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 LGI3Q8N145 548 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 DTD1Q8TEA8 209 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 GATAD1Q8WUU5 269 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 GLMPQ8WWB7 406 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 S100ZQ8WXG8 99 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 GRAMD2BQ96HH9 432 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 RABAC1Q9UI14 185 aa9.14□□□□□ -0.95
CPSF4-208ENST00000452047 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 PFDN1O60925 122 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 ANXA3P12429 323 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 AP3S2P59780 193 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 ZNF846Q147U1 533 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 USF2Q15853 346 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-208ENST00000452047 PYDC2Q56P42 97 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 TMEM128Q5BJH2 165 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 ETFRF1Q6IPR1 90 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 TOMM5Q8N4H5 51 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 STXBP6Q8NFX7 210 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 Q8WTZ3 238 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 NPIPB3Q92617 1050 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 NARS2Q96I59 477 aaKnown RBP9.13□□□□□ -0.95
CPSF4-208ENST00000452047 WDR12Q9GZL7 423 aaKnown RBP9.13□□□□□ -0.95
CPSF4-208ENST00000452047 RBKSQ9H477 322 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 U3KQ87 197 aa9.13□□□□□ -0.95
CPSF4-208ENST00000452047 DUXBA0A1W2PPF3 345 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 PITX3O75364 302 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 CA1P00915 261 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-208ENST00000452047 IFNA10P01566 189 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 IL4P05112 153 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 HNRNPCP07910 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
CPSF4-208ENST00000452047 CEMP1Q6PRD7 247 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-208ENST00000452047 C16orf54Q6UWD8 224 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 TMED4Q7Z7H5 227 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 TRPT1Q86TN4 253 aaKnown RBP9.12□□□□□ -0.95
CPSF4-208ENST00000452047 CCDC190Q86UF4 302 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 TMEM217Q8N7C4 229 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 DEDD2Q8WXF8 326 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 ACY3Q96HD9 319 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 RARRES2Q99969 163 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 KMT2AQ03164 3969 aa9.12□□□□□ -0.95
CPSF4-208ENST00000452047 PIGBOS1A0A0B4J2F0 54 aa9.11□□□□□ -0.95
CPSF4-208ENST00000452047 TOMM40O96008 361 aa9.11□□□□□ -0.95
CPSF4-208ENST00000452047 GIG44P09565 113 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-208ENST00000452047 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
CPSF4-208ENST00000452047 ATP5IP56385 69 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-208ENST00000452047 STHQ8IWL8 128 aa9.11□□□□□ -0.95
CPSF4-208ENST00000452047 OR11H2Q8NH07 326 aa9.11□□□□□ -0.95
CPSF4-208ENST00000452047 SLC25A21Q9BQT8 299 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-208ENST00000452047 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms