RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 I3L2K1 104 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 MPDU1O75352 247 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 MT-CO2P00403 227 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
VPS33A-202ENST00000451053 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 STOML3Q8TAV4 291 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 BSCL2Q96G97 398 aaPredicted RBP10.05□□□□□ -0.8
VPS33A-202ENST00000451053 NPVFQ9HCQ7 196 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 ANK2Q01484 3957 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.04□□□□□ -0.8
VPS33A-202ENST00000451053 SMCO3A2RU48 225 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 CCL24O00175 119 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 SCGB2A1O75556 95 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 IGHV3-48P01763 117 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 PF4P02776 101 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 RAB31Q13636 194 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 RPL7L1Q6DKI1 246 aaKnown RBP10.04□□□□□ -0.8
VPS33A-202ENST00000451053 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
VPS33A-202ENST00000451053 OR1N2Q8NGR9 330 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 VN1R17PQ8TDU5 208 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 SCARB1Q8WTV0 552 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 GNPNAT1Q96EK6 184 aaPredicted RBP10.04□□□□□ -0.8
VPS33A-202ENST00000451053 CXorf58Q96LI9 332 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
VPS33A-202ENST00000451053 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 CYTL1Q9NRR1 136 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 KCNIP2Q9NS61 270 aa10.04□□□□□ -0.8
VPS33A-202ENST00000451053 DNHD1Q96M86 4753 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 MYCNOSP40205 109 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 ZNF616Q08AN1 781 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 FHL3Q13643 280 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 MLANAQ16655 118 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 TEPPQ6URK8 271 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 TMEM144Q7Z5S9 345 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 BAP18Q8IXM2 172 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 ST8SIA2Q92186 375 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 GAR1Q9NY12 217 aaKnown RBP10.03□□□□□ -0.8
VPS33A-202ENST00000451053 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 PEF1Q9UBV8 284 aaKnown RBP10.03□□□□□ -0.8
VPS33A-202ENST00000451053 WDR83OSQ9Y284 106 aa10.03□□□□□ -0.8
VPS33A-202ENST00000451053 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 PPP5D1E7EU14 171 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 F8W735 103 aaPredicted RBP10.02□□□□□ -0.81
VPS33A-202ENST00000451053 LINC01619G3V211 115 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 BMPR1BO00238 502 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.81
VPS33A-202ENST00000451053 FGF7P21781 194 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 GPR183P32249 361 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 NPBWR1P48145 328 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 SLURP1P55000 103 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 MFAP4P55083 255 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 GAMTQ14353 236 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 PRR31Q5SQ13 230 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 ZNF709Q8N972 641 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 DPF1Q92782 380 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 PHYHIPLQ96FC7 376 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 ACY3Q96HD9 319 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 ATP6V0BQ99437 205 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 TXN2Q99757 166 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 GINS3Q9BRX5 216 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 WDR61Q9GZS3 305 aaKnown RBP10.02□□□□□ -0.81
VPS33A-202ENST00000451053 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
VPS33A-202ENST00000451053 MRPL36Q9P0J6 103 aaKnown RBP10.02□□□□□ -0.81
VPS33A-202ENST00000451053 TRAV30A0A087WSZ9 112 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 CLEC3BP05452 202 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 FABP1P07148 127 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
VPS33A-202ENST00000451053 FCGR2BP31994 310 aaPredicted RBP10.01□□□□□ -0.81
VPS33A-202ENST00000451053 ARL3P36405 182 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 RND2P52198 227 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 FAM209BQ5JX69 171 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 BTNL8Q6UX41 500 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 LINC00482Q8N8I6 264 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 HSD17B11Q8NBQ5 300 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 OR4X1Q8NH49 305 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 TIMM9Q9Y5J7 89 aa10.01□□□□□ -0.81
VPS33A-202ENST00000451053 OR2T8A6NH00 312 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 IFNA7P01567 189 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 Q56UQ5 140 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 THAP8Q8NA92 274 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 NPIPB3Q92617 1050 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
VPS33A-202ENST00000451053 CHRDL1Q9BU40 450 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
VPS33A-202ENST00000451053 LSM4Q9Y4Z0 139 aaKnown RBP10□□□□□ -0.81
VPS33A-202ENST00000451053 ZFP92A6NM28 416 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 TGOLN2O43493 480 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 GNG7O60262 68 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 CLN5O75503 358 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 OR2C1O95371 312 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 SEC11BP0C7V7 166 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms