RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CPSF4O95639 269 aaKnown RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 IGKV2D-28P01615 120 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 ZNF14P17017 642 aaPredicted RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 NFYAP23511 347 aaPredicted RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 FKBP2P26885 142 aaKnown RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 CMPK1P30085 196 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 SUPT4H1P63272 117 aaKnown RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 PSG9Q00887 426 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 FOXF1Q12946 379 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 DPPA3Q6W0C5 159 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 Q6ZS52 159 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 LHFPL1Q86WI0 220 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 OR8I2Q8N0Y5 310 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 SIGLECL1Q8N7X8 197 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 OR2T10Q8NGZ9 312 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 MRPL32Q9BYC8 188 aaKnown RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 OR2H1Q9GZK4 316 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 OTORQ9NRC9 128 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 MRPL16Q9NX20 251 aaKnown RBP2.24□□□□□ -2.05
PMS1-216ENST00000447734 NAT8BQ9UHF3 227 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 HSPE1-MOB4S4R3N1 261 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 PLXNB1O43157 2135 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 SOGA1O94964 1423 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 NCOA3Q9Y6Q9 1424 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 TRAV7A0A075B6U4 112 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 TRGV10A0A0A0MS01 117 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 ODAMA1E959 279 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 ARRDC5A6NEK1 342 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 CST7O76096 145 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 TCL1BO95988 128 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 RNASE4P34096 147 aaKnown RBP2.23□□□□□ -2.05
PMS1-216ENST00000447734 RHOGP84095 191 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 LYZL1Q6UWQ5 148 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 DYNAPQ8N1N2 210 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 PFN4Q8NHR9 129 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 RNASE11Q8TAA1 199 aaKnown RBP2.23□□□□□ -2.05
PMS1-216ENST00000447734 POPDC3Q9HBV1 291 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 EPDR1Q9UM22 224 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 ECM29Q5VYK3 1845 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 PRR14LQ5THK1 2151 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 DOCK4Q8N1I0 1966 aa2.23□□□□□ -2.05
PMS1-216ENST00000447734 TOPBP1Q92547 1522 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 CAMSAP2Q08AD1 1489 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 A0A0D9SG52 128 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 H7C2G1 150 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 TNFSF15O95150 251 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 CXCL1P09341 107 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 SDC4P31431 198 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 SDC2P34741 201 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 DYNLT3P51808 116 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 TMBIM6P55061 237 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 NDUFA6P56556 154 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 SLC38A11Q08AI6 406 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 MOBPQ13875 183 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 MSMO1Q15800 293 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 KHDC3LQ587J8 217 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 C22orf39Q6P5X5 142 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 SLC35E3Q7Z769 313 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 KRTAP11-1Q8IUC1 163 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 Q8NDZ9 215 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 ADAT1Q9BUB4 502 aaKnown RBP2.22□□□□□ -2.05
PMS1-216ENST00000447734 TCEAL2Q9H3H9 227 aaPredicted RBP2.22□□□□□ -2.05
PMS1-216ENST00000447734 TPT1P8Q9HAU6 139 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 PAIP2BQ9ULR5 123 aaKnown RBP2.22□□□□□ -2.05
PMS1-216ENST00000447734 RNF11Q9Y3C5 154 aa2.22□□□□□ -2.05
PMS1-216ENST00000447734 NYNRINQ9P2P1 1898 aaKnown RBP2.22□□□□□ -2.05
PMS1-216ENST00000447734 TP53BP1Q12888 1972 aaPredicted RBP2.21□□□□□ -2.05
PMS1-216ENST00000447734 TRAV5A0A0B4J249 113 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 A0A0J9YX75 114 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 C9JAW5 83 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 C3orf84H3BNL1 204 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 NDUFB3O43676 98 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 NAPSAO96009 420 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 UBBP0CG47 229 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 FABP2P12104 132 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 DEFA4P12838 97 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 HRES1P13985 223 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 ARPP19P56211 112 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 KRTAP10-12P60413 245 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 SPCS2Q15005 226 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 PYDC2Q56P42 97 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 PABPC1L2AQ5JQF8 200 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 EIF5AL1Q6IS14 154 aaKnown RBP2.21□□□□□ -2.06
PMS1-216ENST00000447734 CD109Q6YHK3 1445 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 LRRC18Q8N456 261 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 ZC2HC1AQ96GY0 325 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 CYYR1Q96J86 154 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 VPS25Q9BRG1 176 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 LXNQ9BS40 222 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 PRADC1Q9BSG0 188 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 ZNF471Q9BX82 626 aaPredicted RBP2.21□□□□□ -2.06
PMS1-216ENST00000447734 NPCDR1Q9BY65 106 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 HHLA3Q9XRX5 114 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 MYH10P35580 1976 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 DENND4CQ5VZ89 1909 aa2.21□□□□□ -2.06
PMS1-216ENST00000447734 MED1Q15648 1581 aaPredicted RBP2.2□□□□□ -2.06
PMS1-216ENST00000447734 OVOS2A0A0G2JMS6 1433 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms