RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 TAS2R30P59541 319 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 VAMP2P63027 116 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
SF3A1-204ENST00000447376 BTNL8Q6UX41 500 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 FNDC4Q9H6D8 234 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-204ENST00000447376 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
SF3A1-204ENST00000447376 TRAV25A0A0B4J276 109 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 GOSR2O14653 212 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 CLN5O75503 358 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-204ENST00000447376 CD81P60033 236 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 C11orf87Q6NUJ2 197 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 ADAMTSL5Q6ZMM2 481 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 SLC35E1Q96K37 410 aa12.38□□□□□ -0.43
SF3A1-204ENST00000447376 IZUMO1RA6ND01 250 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 TMEM50AO95807 157 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 C8orf88P0DMB2 117 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 MLANAQ16655 118 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 TMEM116Q8NCL8 245 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
SF3A1-204ENST00000447376 MLXQ9UH92 298 aa12.37□□□□□ -0.43
SF3A1-204ENST00000447376 LSM5Q9Y4Y9 91 aaKnown RBP12.37□□□□□ -0.43
SF3A1-204ENST00000447376 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 TRAV14DV4A0A0A6YYC5 116 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 H3BP45 60 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 TSC22D2O75157 780 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 FRMD6-AS1P0C7T7 363 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 EDN2P20800 178 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 RND2P52198 227 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 S100A10P60903 97 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 TMEM61Q8N0U2 210 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 WDR89Q96FK6 387 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-204ENST00000447376 ACY3Q96HD9 319 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 NEURL2Q9BR09 285 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 NMES1Q9C002 83 aa12.36□□□□□ -0.43
SF3A1-204ENST00000447376 K7EPK0 472 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 ZNF207O43670 478 aaKnown RBP12.35□□□□□ -0.43
SF3A1-204ENST00000447376 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
SF3A1-204ENST00000447376 RLN2P04090 185 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 CD5P06127 495 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 SPAG8Q99932 426 aaPredicted RBP12.35□□□□□ -0.43
SF3A1-204ENST00000447376 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 ZMAT4Q9H898 229 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
SF3A1-204ENST00000447376 PUS1Q9Y606 427 aaKnown RBP eCLIP12.35□□□□□ -0.43
SF3A1-204ENST00000447376 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
SF3A1-204ENST00000447376 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 A8MZ25 164 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 FABP1P07148 127 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 OR10J1P30954 320 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 BCAP31P51572 246 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 PAX9P55771 341 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 Q8N1Y9 231 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 Q8WTZ3 238 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 ASCL2Q99929 193 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
SF3A1-204ENST00000447376 SMPXQ9UHP9 88 aa12.34□□□□□ -0.43
SF3A1-204ENST00000447376 A0A1W2PS18 150 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 OR4C46A6NHA9 309 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 SIX6O95475 246 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 NPPCP23582 126 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 IL15RAQ13261 267 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 RAB32Q13637 225 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 GAMTQ14353 236 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 OXA1LQ15070 435 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 OR10P1Q8NGE3 313 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 METTL26Q96S19 204 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 MED28Q9H204 178 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 SELENOKQ9Y6D0 94 aa12.33□□□□□ -0.44
SF3A1-204ENST00000447376 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 TSPAN4O14817 238 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 METTL15P1P0C7V9 234 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 IGLC1P0CG04 106 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 CAV2P51636 162 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 YPEL3P61236 119 aaPredicted RBP12.32□□□□□ -0.44
SF3A1-204ENST00000447376 TIGITQ495A1 244 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 OR8G2PQ6IF36 304 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
SF3A1-204ENST00000447376 IGKV1-17P01599 117 aa12.31□□□□□ -0.44
SF3A1-204ENST00000447376 CD7P09564 240 aa12.31□□□□□ -0.44
SF3A1-204ENST00000447376 PET100P0DJ07 73 aa12.31□□□□□ -0.44
SF3A1-204ENST00000447376 AKR1C1Q04828 323 aa12.31□□□□□ -0.44
SF3A1-204ENST00000447376 U3KQK5 164 aa12.31□□□□□ -0.44
SF3A1-204ENST00000447376 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
SF3A1-204ENST00000447376 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms