RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 C10orf113Q5VZT2 155 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 C22orf15Q8WYQ4 148 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 PFDN5Q99471 154 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 TRGV9Q99603 122 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 AURKAIP1Q9NWT8 199 aaPredicted RBP13.84□□□□□ -0.19
SMC6-206ENST00000446852 KLF2Q9Y5W3 355 aaPredicted RBP13.84□□□□□ -0.19
SMC6-206ENST00000446852 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 CSMD2Q7Z408 3487 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 I3L2K1 104 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 OR1L4Q8NGR5 311 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 RNF2Q99496 336 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 ZNF355PQ9NSJ1 428 aa13.84□□□□□ -0.19
SMC6-206ENST00000446852 TBL2Q9Y4P3 447 aaKnown RBP13.84□□□□□ -0.19
SMC6-206ENST00000446852 RPS10P46783 165 aaKnown RBP13.83□□□□□ -0.2
SMC6-206ENST00000446852 OR5T1Q8NG75 326 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 OR5AU1Q8NGC0 362 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 C11orf52Q96A22 123 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 PRELID1Q9Y255 219 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 SAA4P35542 130 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 BPIFB3P59826 476 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 NDPQ00604 133 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 FAM168AQ92567 244 aa13.83□□□□□ -0.2
SMC6-206ENST00000446852 IGHV4-61A0A0C4DH41 118 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 NCBP2LA6PVI3 153 aaKnown RBP13.82□□□□□ -0.2
SMC6-206ENST00000446852 GGTLC3B5MD39 225 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 PYYP10082 97 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 CX3CL1P78423 397 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 FAM120AOSQ5T036 256 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 ASPHD1Q5U4P2 390 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 C1QL4Q86Z23 238 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 C10orf105Q8TEF2 133 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 SPOCK3Q9BQ16 436 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 PIMREGQ9BSJ6 248 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
SMC6-206ENST00000446852 POLR3KQ9Y2Y1 108 aaPredicted RBP13.82□□□□□ -0.2
SMC6-206ENST00000446852 FAM208BQ5VWN6 2430 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 K7EIM0 57 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 TMEM11P17152 192 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 ORM2P19652 201 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 UBE2L3P68036 154 aaKnown RBP13.81□□□□□ -0.2
SMC6-206ENST00000446852 LINC00305Q7Z4B0 112 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 NECAP1Q8NC96 275 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 ELOVL1Q9BW60 279 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 CENPEQ02224 2701 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 H7BYZ3 331 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 IGLC1P0CG04 106 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 KLF17Q5JT82 389 aaPredicted RBP13.81□□□□□ -0.2
SMC6-206ENST00000446852 ZNF562Q6V9R5 426 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 OR1B1Q8NGR6 318 aa13.81□□□□□ -0.2
SMC6-206ENST00000446852 ARPC1AQ92747 370 aa13.8□□□□□ -0.2
SMC6-206ENST00000446852 ELOA3CA0A087WX78 387 aaPredicted RBP13.8□□□□□ -0.2
SMC6-206ENST00000446852 VWC2LB2RUY7 222 aa13.8□□□□□ -0.2
SMC6-206ENST00000446852 PFN1P07737 140 aaKnown RBP13.8□□□□□ -0.2
SMC6-206ENST00000446852 ZNF843Q8N446 348 aa13.8□□□□□ -0.2
SMC6-206ENST00000446852 FAM210BQ96KR6 192 aa13.8□□□□□ -0.2
SMC6-206ENST00000446852 TRBV24-1A0A075B6N3 115 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 CRYBB3P26998 211 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 RPL35P42766 123 aaKnown RBP13.79□□□□□ -0.2
SMC6-206ENST00000446852 ATP5J2P56134 94 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 ANAPC16Q96DE5 110 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 FBN2P35556 2912 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 CENPVL3A0A0U1RRI6 287 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 A0A1W2PRE2 83 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 SNRPEP62304 92 aaKnown RBP13.79□□□□□ -0.2
SMC6-206ENST00000446852 OCC1Q8TAD7 63 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 PAXXQ9BUH6 204 aa13.79□□□□□ -0.2
SMC6-206ENST00000446852 NPFFO15130 113 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 HNF1AP20823 631 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 GALR1P47211 349 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 SUMO1P63165 101 aaKnown RBP13.78□□□□□ -0.2
SMC6-206ENST00000446852 Q8N9W7 124 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 NRGNQ92686 78 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 FXYD5Q96DB9 178 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 OR51M1Q9H341 326 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 IGHV4-30-2A0A087WSY4 118 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 IGKV1-17P01599 117 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 PSG1P11464 419 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 PAX8Q06710 450 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 TIGITQ495A1 244 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 CLEC2AQ6UVW9 174 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 PERPQ96FX8 193 aa13.78□□□□□ -0.2
SMC6-206ENST00000446852 NPIPB5A8MRT5 1133 aa13.77□□□□□ -0.21
SMC6-206ENST00000446852 NDUFS8O00217 210 aa13.77□□□□□ -0.21
SMC6-206ENST00000446852 PLP1P60201 277 aa13.77□□□□□ -0.21
SMC6-206ENST00000446852 FANCD2OSQ96PS1 177 aa13.77□□□□□ -0.21
SMC6-206ENST00000446852 IGHV7-81A0A0B4J1V7 117 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 C5orf52A6NGY3 159 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 K7EN84 100 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 HYPMO75409 117 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 SNRPCP09234 159 aaKnown RBP13.76□□□□□ -0.21
SMC6-206ENST00000446852 SRSF1Q07955 248 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMC6-206ENST00000446852 OR1L6Q8NGR2 347 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
SMC6-206ENST00000446852 ANKRD17O75179 2603 aaKnown RBP13.76□□□□□ -0.21
SMC6-206ENST00000446852 IGLV11-55A0A075B6I3 123 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 C9JCJ5 164 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 EGR2P11161 476 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms