RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312		P0C879	139 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	RHOB	P62745	196 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	TIGIT	Q495A1	244 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	TMEM177	Q53S58	311 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312		Q71RC1	249 aa	Predicted RBP	10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	CCL3L1	P16619	93 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	USF1	P22415	310 aa	Predicted RBP	10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	RHOG	P84095	191 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	C5orf17	Q8NAS9	161 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	SIGMAR1	Q99720	223 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	CALY	Q9NYX4	217 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312		S4R3C0	116 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	GGTLC3	B5MD39	225 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312		E7EUB6	86 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	TMPRSS2	O15393	492 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	UBE2L3	P68036	154 aa	Known RBP	10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	FAM214B	Q7L5A3	538 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	GCSAM	Q8N6F7	178 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	ZNF439	Q8NDP4	499 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	CDC42EP3	Q9UKI2	254 aa		10.26	□□□□□ -0.77
DDR1-238	ENST00000446312	IQCF6	A8MYZ5	107 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	NPIPB11	E5RHQ5	1161 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	C15orf65	H3BRN8	121 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312		K7EQM0	130 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	ACSF3	Q4G176	576 aa	Predicted RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	STUM	Q69YW2	141 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	TCF24	Q7RTU0	167 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	IFI27L2	Q9H2X8	130 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	MRPS16	Q9Y3D3	137 aa	Known RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	DCHS2	Q6V1P9	2916 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	IGLC7	A0M8Q6	106 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	FBLL1	A6NHQ2	334 aa	Known RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	KIR2DL2	P43627	348 aa	Predicted RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	VDAC2	P45880	294 aa	Predicted RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	LCN2	P80188	198 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	IBA57	Q5T440	356 aa	Known RBP	10.25	□□□□□ -0.77
DDR1-238	ENST00000446312	WDR31	Q8NA23	367 aa		10.25	□□□□□ -0.77
DDR1-238	ENST00000446312		G3V4G9	280 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	OPRK1	P41145	380 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	LRRC10	Q5BKY1	277 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	C22orf34	Q6ZV56	151 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	COLQ	Q9Y215	455 aa	Predicted RBP	10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	C3orf79	P0CE67	100 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	DEFB109B	Q30KR1	87 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	PRO3102	Q9H379	93 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	CUBN	O60494	3623 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	IGHV1-18	A0A0C4DH31	117 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	TYMS	P04818	313 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	FOXL1	Q12952	345 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	NRN1L	Q496H8	165 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	FAM71F2	Q6NXP2	309 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	OR52E5	Q8NH55	327 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312		V9GYV3	84 aa		10.24	□□□□□ -0.77
DDR1-238	ENST00000446312	SPAAR	A0A1B0GVQ0	90 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312		A0A1W2PS18	150 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	TAX1BP3	O14907	124 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	HSBP1	O75506	76 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	CNIH1	O95406	144 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	FXYD7	P58549	80 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	ZNF788	Q6ZQV5	615 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	LINC00173	Q6ZV60	143 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	NAA38	Q9BRA0	125 aa	Known RBP	10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	CTRL	P40313	264 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	TNXA	Q16473	311 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	FAM222B	Q8WU58	562 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	NPIPB3	Q92617	1050 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	ARL2-SNX15	V9GYD0	113 aa		10.23	□□□□□ -0.77
DDR1-238	ENST00000446312	TRAV8-6	A0A0B4J262	113 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	PIGBOS1	A0A0B4J2F0	54 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	BMPR1B	O00238	502 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	GPX1	P07203	203 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	RPS20	P60866	119 aa	Known RBP	10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	RUSC1-AS1	Q66K80	236 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	IDI2-AS1	Q9NZ38	188 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	SS18L2	Q9UHA2	77 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	CREBBP	Q92793	2442 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	NOTCH3	Q9UM47	2321 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	TRAV8-1	A0A0A6YYK1	113 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	IGHV2-26	A0A0B4J1V2	119 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	ZNF503	Q96F45	646 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	APCS	P02743	223 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	LINC00869	P0C866	280 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	HSPE1	P61604	102 aa	Known RBP	10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	FAM27E3	Q08E93	113 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	ZBTB34	Q8NCN2	500 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	MDS2	Q8NDY4	140 aa		10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	FLYWCH2	Q96CP2	140 aa	Known RBP	10.22	□□□□□ -0.77
DDR1-238	ENST00000446312	MRPL36	Q9P0J6	103 aa	Known RBP	10.22	□□□□□ -0.77
DDR1-238	ENST00000446312		M0R2Z0	102 aa		10.21	□□□□□ -0.77
DDR1-238	ENST00000446312	ISLR	O14498	428 aa		10.21	□□□□□ -0.77
DDR1-238	ENST00000446312	APOA2	P02652	100 aa		10.21	□□□□□ -0.77
DDR1-238	ENST00000446312	ZNF841	Q6ZN19	808 aa		10.21	□□□□□ -0.77
DDR1-238	ENST00000446312		Q6ZT83	130 aa		10.21	□□□□□ -0.77
DDR1-238	ENST00000446312	GUCD1	Q96NT3	240 aa		10.21	□□□□□ -0.77

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