RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 FGF7P21781 194 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 CX3CL1P78423 397 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 SERF2P84101 59 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 SRSF3P84103 164 aaKnown RBP7.21□□□□□ -1.25
LINC00642-203ENST00000444942 GUK1Q16774 197 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 TMEM177Q53S58 311 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 NDUFA11Q86Y39 141 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 PUSL1Q8N0Z8 303 aaKnown RBP7.21□□□□□ -1.25
LINC00642-203ENST00000444942 SVBPQ8N300 66 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 OSR1Q8TAX0 266 aaPredicted RBP7.21□□□□□ -1.25
LINC00642-203ENST00000444942 RSG1Q9BU20 258 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 SEC11CQ9BY50 192 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.25
LINC00642-203ENST00000444942 RFNGQ9Y644 331 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 TRAV3A0A0B4J244 114 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 A0A1W2PN81 502 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 C15orf62A8K5M9 175 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 PMS2P5A8MQ11 134 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 C17orf112F2Z3M2 114 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 UPK2O00526 184 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 RPLP1P05386 114 aaKnown RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 CD5P06127 495 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SFTA3P0C7M3 94 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SAA1P0DJI8 122 aaPredicted RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 PF4V1P10720 104 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ADCYAP1P18509 176 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 M6PRP20645 277 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 CHRNA7P36544 502 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 HSPE1P61604 102 aaKnown RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 RAB11AP62491 216 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 FXYD3Q14802 87 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TNXAQ16473 311 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 VWC2Q2TAL6 325 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 VMA21Q3ZAQ7 101 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TMEM41BQ5BJD5 291 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 UNQ5815/PRO19632Q6UWF5 114 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 PPP1R27Q86WC6 154 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 KLHL30-AS1Q8NEE0 82 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 GATAD1Q8WUU5 269 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 RNF5Q99942 180 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 EIF5A2Q9GZV4 153 aaKnown RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TMEM14BQ9NUH8 114 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 FKBP11Q9NYL4 201 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 BET1LQ9NYM9 111 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TSSC4Q9Y5U2 329 aaPredicted RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 A0A1B0GV50 99 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 A0A1B0GW64 132 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 KBTBD11O94819 623 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SNAPINO95295 136 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 CRYGBP07316 175 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 HOXD3P31249 432 aaPredicted RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 LGALS7P47929 136 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ELLP55199 621 aaPredicted RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 DLK1P80370 383 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 C10orf91Q5T1B1 145 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TEX38Q6PEX7 206 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ETV3LQ6ZN32 361 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SLC24A4Q8NFF2 622 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 OR5T1Q8NG75 326 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 OR4A5Q8NH83 315 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 VSTM2AQ8TAG5 236 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ARPC1AQ92747 370 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 RCC1LQ96I51 464 aaKnown RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 MS4A10Q96PG2 267 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 OR5B12Q96R08 314 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 GGACTQ9BVM4 153 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 KLK15Q9H2R5 256 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SMDT1Q9H4I9 107 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 PLEKHA3Q9HB20 300 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF355PQ9NSJ1 428 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF257Q9Y2Q1 563 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
LINC00642-203ENST00000444942 OR51B2Q9Y5P1 312 aa7.2□□□□□ -1.26
LINC00642-203ENST00000444942 SMCO3A2RU48 225 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 SOX15O60248 233 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 MBP02144 154 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 PF4P02776 101 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 IL6RP08887 468 aaPredicted RBP7.19□□□□□ -1.26
LINC00642-203ENST00000444942 EGR2P11161 476 aaPredicted RBP7.19□□□□□ -1.26
LINC00642-203ENST00000444942 MYOD1P15172 320 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 NPY1RP25929 384 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 PPT1P50897 306 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 PRCDQ00LT1 54 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 BTN1A1Q13410 526 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 DEFB136Q30KP8 78 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 C10orf55Q5SWW7 151 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 SPSB3Q6PJ21 355 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 TEX45Q8NA69 505 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 OR5B3Q8NH48 314 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 SFT2D1Q8WV19 159 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 ASCL2Q99929 193 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 HINT2Q9BX68 163 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 WDR83OSQ9Y284 106 aa7.19□□□□□ -1.26
LINC00642-203ENST00000444942 TRAV1-1A0A0B4J248 108 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms