RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.69
SSXP3-201ENST00000442971 PAX9P55771 341 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 WNT4P56705 351 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 RELQ04864 619 aaPredicted RBP4.46□□□□□ -1.69
SSXP3-201ENST00000442971 MRPL28Q13084 256 aaKnown RBP4.46□□□□□ -1.69
SSXP3-201ENST00000442971 TPBGQ13641 420 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 GAPTQ8N292 157 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 MS4A15Q8N5U1 240 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 CCDC54Q8NEL0 328 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 OR10K1Q8NGX5 313 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 UFD1Q92890 307 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 RFKQ969G6 155 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 HYLS1Q96M11 299 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 NIPSNAP1Q9BPW8 284 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 FGF20Q9NP95 211 aaPredicted RBP4.46□□□□□ -1.69
SSXP3-201ENST00000442971 IL36GQ9NZH8 169 aa4.46□□□□□ -1.69
SSXP3-201ENST00000442971 TRDV1A0A1B0GX56 115 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 RIIAD1A6NNX1 92 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 CTDSP2O14595 271 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TAAR5O14804 337 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 GEMIN2O14893 280 aaKnown RBP4.46□□□□□ -1.7
SSXP3-201ENST00000442971 CRYZL1O95825 349 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 IFNGP01579 166 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 CTSGP08311 255 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 ZNF735P0CB33 412 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 RCVRNP35243 200 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TGFBR1P36897 503 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 RPL27AP46776 148 aaKnown RBP4.46□□□□□ -1.7
SSXP3-201ENST00000442971 INPP1P49441 399 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 AP2S1P53680 142 aaPredicted RBP4.46□□□□□ -1.7
SSXP3-201ENST00000442971 DHRS2Q13268 280 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TRAM1Q15629 374 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 ZNF79Q15937 498 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 PYDC2Q56P42 97 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 GDF5OSQ5U4N7 250 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 RPL13AP3Q6NVV1 102 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 Q8N976 141 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 UBAC2Q8NBM4 344 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 PXT1Q8NFP0 134 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 OR9Q2Q8NGE9 314 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 OR8D4Q8NGM9 314 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 OR10AC1Q8NH08 325 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 SUN5Q8TC36 379 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 DIRAS2Q96HU8 199 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TXN2Q99757 166 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 GINS3Q9BRX5 216 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 MARVELD1Q9BSK0 173 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TSSK6Q9BXA6 273 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TMEM231Q9H6L2 316 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 AMBNQ9NP70 447 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 GHRLQ9UBU3 117 aa4.46□□□□□ -1.7
SSXP3-201ENST00000442971 TIMM8BQ9Y5J9 83 aaPredicted RBP4.46□□□□□ -1.7
SSXP3-201ENST00000442971 FAM240BA0A1B0GVZ2 78 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 A0A1W2PQL4 384 aaPredicted RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 H3BN98 237 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 M0R1X1 148 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 ZNF780AO75290 641 aaPredicted RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 CDRT1O95170 752 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 CHTF8P0CG12 524 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 SRMP19623 302 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 TALDO1P37837 337 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 CCR9P51686 369 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 RBM11P57052 281 aaKnown RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 RRAS2P62070 204 aaPredicted RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 SNRPD3P62318 126 aaKnown RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 CNBPP62633 177 aaKnown RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 NHLH2Q02577 135 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 TSPAN31Q12999 210 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 RSU1Q15404 277 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 OR52N1Q8NH53 320 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 TEX47Q8TBZ9 253 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 IL1F10Q8WWZ1 152 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 ASB17Q8WXJ9 295 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 BAALCQ8WXS3 180 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 FGGYQ96C11 551 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 C8orf49Q96NF6 230 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 SOSTQ9BQB4 213 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 NOP10Q9NPE3 64 aaKnown RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 TXNL4BQ9NX01 149 aaKnown RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 C21orf62Q9NYP8 219 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 IL20Q9NYY1 176 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 COPZ2Q9P299 210 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 EXOGQ9Y2C4 368 aaKnown RBP4.45□□□□□ -1.7
SSXP3-201ENST00000442971 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
SSXP3-201ENST00000442971 IGHV3-21A0A0B4J1V1 117 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 MCRIP1C9JLW8 97 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 ITGB1BP1O14713 200 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 MAGEB4O15481 346 aaPredicted RBP4.44□□□□□ -1.7
SSXP3-201ENST00000442971 LYRM1O43325 122 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 HMGN1P05114 100 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 SAA1P0DJI8 122 aaPredicted RBP4.44□□□□□ -1.7
SSXP3-201ENST00000442971 HTR2BP41595 481 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 TAS2R43P59537 309 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
SSXP3-201ENST00000442971 CDK5Q00535 292 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 BAK1Q16611 211 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 RTL8BQ17RB0 113 aa4.44□□□□□ -1.7
SSXP3-201ENST00000442971 CCDC58Q4VC31 144 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms