RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 DEFA6Q01524 100 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 PEMTQ9UBM1 199 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 IGKV1D-37A0A075B6S9 117 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 TSC22D2O75157 780 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 CXCL3P19876 107 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 CBLN1P23435 193 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 OR10J1P30954 320 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 RELQ04864 619 aaPredicted RBP12.14□□□□□ -0.47
USP39-205ENST00000442708 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 TOMM20LQ6UXN7 152 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 C20orf24Q9BUV8 137 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 NMES1Q9C002 83 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
USP39-205ENST00000442708 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 H0YIZ8 118 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 C8orf88P0DMB2 117 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 FCN2Q15485 313 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 OR11H7Q8NGC8 314 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
USP39-205ENST00000442708 MLXQ9UH92 298 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 UFC1Q9Y3C8 167 aa12.13□□□□□ -0.47
USP39-205ENST00000442708 PUS1Q9Y606 427 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP39-205ENST00000442708 TGP01266 2768 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 IGKV1OR2-108A0A075B7D4 117 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 WI2-2373I1.2A0A1W2PRP0 233 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 L7N2F9 121 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 DEDDO75618 318 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 YIF1AO95070 293 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 ELLP55199 621 aaPredicted RBP12.12□□□□□ -0.47
USP39-205ENST00000442708 VAMP2P63027 116 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 SLC35E1Q96K37 410 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 OR5AC2Q9NZP5 309 aa12.12□□□□□ -0.47
USP39-205ENST00000442708 SORL1Q92673 2214 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 TRAV30A0A087WSZ9 112 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 IGSF23A1L1A6 192 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 K7EMT4 169 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
USP39-205ENST00000442708 DEFB114Q30KQ6 69 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 LRRC37A5PQ49AS3 106 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 PRR25Q96S07 402 aa12.11□□□□□ -0.47
USP39-205ENST00000442708 DAZ1Q9NQZ3 744 aaKnown RBP12.11□□□□□ -0.47
USP39-205ENST00000442708 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 SCAF4O95104 1147 aaKnown RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 APOHP02749 345 aaPredicted RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 BCAP31P51572 246 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 CAV2P51636 162 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 RRAS2P62070 204 aaPredicted RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 CYCSP99999 105 aaKnown RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 ZNF90Q03938 601 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 THAP8Q8NA92 274 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 PPP1R1CQ8WVI7 109 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 RNF126Q9BV68 326 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 MED28Q9H204 178 aa12.1□□□□□ -0.47
USP39-205ENST00000442708 LYRM2Q9NU23 88 aaPredicted RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 MRPL27Q9P0M9 148 aaKnown RBP12.1□□□□□ -0.47
USP39-205ENST00000442708 K7EIL1 84 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 CST7O76096 145 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 DLK1P80370 383 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 OR10P1Q8NGE3 313 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 DYNLRB2Q8TF09 96 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
USP39-205ENST00000442708 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
USP39-205ENST00000442708 IGHV3OR16-13A0A075B7E8 117 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 IGHV3-74A0A0B4J1X5 117 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 IGHV7-4-1A0A0J9YVY3 117 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 ZFP92A6NM28 416 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 ZNF785A8K8V0 405 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 MPC2O95563 127 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 TOMM40O96008 361 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 PSG1P11464 419 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 PVALBP20472 110 aaPredicted RBP12.08□□□□□ -0.48
USP39-205ENST00000442708 TMEM182Q6ZP80 229 aaPredicted RBP12.08□□□□□ -0.48
USP39-205ENST00000442708 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 TRGV9Q99603 122 aa12.08□□□□□ -0.48
USP39-205ENST00000442708 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.48
USP39-205ENST00000442708 TRAV14DV4A0A0A6YYC5 116 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 SMCO3A2RU48 225 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 CHEK1O14757 476 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 RD3LP0DJH9 198 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 GP9P14770 177 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 AKR1C1Q04828 323 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 OR2F1Q13607 317 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 USF2Q15853 346 aaPredicted RBP12.07□□□□□ -0.48
USP39-205ENST00000442708 TMEM144Q7Z5S9 345 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 TMEM61Q8N0U2 210 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 LILRB2Q8N423 598 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 Q8WTZ3 238 aa12.07□□□□□ -0.48
USP39-205ENST00000442708 IGHV3-66A0A0C4DH42 116 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms