RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 RBPMSQ93062 196 aaKnown RBP5.75□□□□□ -1.49
CD44-211ENST00000442151 IL22RA2Q969J5 263 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 SEPSECSQ9HD40 501 aaKnown RBP5.75□□□□□ -1.49
CD44-211ENST00000442151 KLK11Q9UBX7 282 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 STAB2Q8WWQ8 2551 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 A0A0B4J293 547 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 CEBPZOSA8MTT3 80 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 LY6G6CO95867 125 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 SCGB1D2O95969 90 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 RNASE2P10153 161 aaKnown RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 NUTF2P61970 127 aaKnown RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 SRPXP78539 464 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 PMS2P11Q13670 270 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 OR13C8Q8NGS7 320 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 OR11H2Q8NH07 326 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 C11orf45Q8TAV5 145 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 TP53RKQ96S44 253 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 TMEM222Q9H0R3 208 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 MS4A6AQ9H2W1 248 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 NAA60Q9H7X0 242 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 RABAC1Q9UI14 185 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 SELENOKQ9Y6D0 94 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 IGKV3-7A0A075B6H7 116 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 C11orf94C9JXX5 98 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 IGKV1-5P01602 117 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 PPP5CP53041 499 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 AP3S2P59780 193 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 YPEL3P61236 119 aaPredicted RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 RPP30P78346 268 aaKnown RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 RBMS2Q15434 407 aaKnown RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 CTF1Q16619 201 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 C2orf83Q53S99 150 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 RNASE12Q5GAN4 147 aaKnown RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 APRG1Q8IVJ8 170 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 GBGT1Q8N5D6 347 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 MARCH1Q8TCQ1 289 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 RAB2BQ8WUD1 216 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 DIRAS2Q96HU8 199 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 C1QTNF4Q9BXJ3 329 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 C11orf68Q9H3H3 251 aaKnown RBP5.74□□□□□ -1.49
CD44-211ENST00000442151 U3KQ87 197 aa5.74□□□□□ -1.49
CD44-211ENST00000442151 EPPK1P58107 5090 aaKnown RBP5.73□□□□□ -1.49
CD44-211ENST00000442151 IGHV3OR16-8A0A075B7F1 116 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 CA1P00915 261 aaPredicted RBP5.73□□□□□ -1.49
CD44-211ENST00000442151 HNRNPCP07910 306 aaKnown RBP eCLIP5.73□□□□□ -1.49
CD44-211ENST00000442151 P0C879 139 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 SULT1A3P0DMM9 295 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 SULT1A4P0DMN0 295 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 PI3P19957 117 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 CRYBB3P26998 211 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 CCR6P51684 374 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 DEFB131AP59861 70 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 SNRPD3P62318 126 aaKnown RBP5.73□□□□□ -1.49
CD44-211ENST00000442151 IL18Q14116 193 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 SP6Q3SY56 376 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 AARDQ4LEZ3 155 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 SAMD13Q5VXD3 122 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 CLVS1Q8IUQ0 354 aaPredicted RBP5.73□□□□□ -1.49
CD44-211ENST00000442151 PHLDA1Q8WV24 401 aaPredicted RBP5.73□□□□□ -1.49
CD44-211ENST00000442151 SMIM4Q8WVI0 70 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 LINC00476Q8WZB0 136 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 ST8SIA2Q92186 375 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 GPR132Q9UNW8 380 aa5.73□□□□□ -1.49
CD44-211ENST00000442151 DYNC2H1Q8NCM8 4307 aaKnown RBP5.73□□□□□ -1.49
CD44-211ENST00000442151 IGHV3-49A0A0A0MS15 119 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 MED6O75586 246 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 CFDP00746 253 aaPredicted RBP5.72□□□□□ -1.49
CD44-211ENST00000442151 OR5AC1P0C628 307 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 MIFP14174 115 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 NPY1RP25929 384 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 P2RY1P47900 373 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 TMBIM6P55061 237 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 RAB11AP62491 216 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 LGALS9CQ6DKI2 356 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 SELENOHQ8IZQ5 122 aaKnown RBP5.72□□□□□ -1.49
CD44-211ENST00000442151 LGI3Q8N145 548 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 SLC24A4Q8NFF2 622 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 STXBP6Q8NFX7 210 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 DEDD2Q8WXF8 326 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 CCDC59Q9P031 241 aaKnown RBP5.72□□□□□ -1.49
CD44-211ENST00000442151 FBXL17Q9UF56 701 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 TMEM56-RWDD3S4R434 201 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 RYR2Q92736 4967 aa5.72□□□□□ -1.49
CD44-211ENST00000442151 DUXBA0A1W2PPF3 345 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 CRYM-AS1A6NIL9 109 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 K7EQG2 157 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 IFNA10P01566 189 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 IGHV3-48P01763 117 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 RD3LP0DJH9 198 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 AKR1C4P17516 323 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 OR10J1P30954 320 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 GPX4P36969 197 aaPredicted RBP5.71□□□□□ -1.49
CD44-211ENST00000442151 ID1P41134 155 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 DHRS2Q13268 280 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 BSXQ3C1V8 233 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 SPINK9Q5DT21 86 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 TMEM268Q5VZI3 342 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 S100A7AQ86SG5 101 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 C2CD4CQ8TF44 421 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 GLYATL2Q8WU03 294 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms