RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RASL12Q9NYN1 266 aa0.91□□□□□ -2.26
PFDN4-202ENST00000441080 HECW2Q9P2P5 1572 aa0.91□□□□□ -2.26
PFDN4-202ENST00000441080 FBN2P35556 2912 aa0.9□□□□□ -2.26
PFDN4-202ENST00000441080 A0A087X0T9 212 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 hADV38S2A0JD32 116 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 C7orf71A4D174 169 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 CLDN25C9JDP6 229 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 AESQ08117 197 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 DEFB113Q30KQ7 82 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 C12orf74Q32Q52 190 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 C1orf137Q5JT78 98 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 C2orf50Q96LR7 162 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 OR51V1Q9H2C8 321 aa0.9□□□□□ -2.27
PFDN4-202ENST00000441080 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.9□□□□□ -2.27
PFDN4-202ENST00000441080 V9GYY5 206 aaPredicted RBP0.9□□□□□ -2.27
PFDN4-202ENST00000441080 TNRC6BQ9UPQ9 1833 aaKnown RBP0.89□□□□□ -2.27
PFDN4-202ENST00000441080 DOCK5Q9H7D0 1870 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 NEO1Q92859 1461 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 hCG_1818297A0A087WSY0 165 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 A8MT66 165 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 INE1O15225 51 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 ZNF682O95780 498 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 BRMS1LQ5PSV4 323 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 TEX261Q6UWH6 196 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 C12orf45Q8N5I9 185 aaPredicted RBP0.89□□□□□ -2.27
PFDN4-202ENST00000441080 C3orf56Q8N813 242 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 OR8D4Q8NGM9 314 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 TRIM4Q9C037 500 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 C14orf105Q9NVL8 296 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 UTP11Q9Y3A2 253 aaKnown RBP0.89□□□□□ -2.27
PFDN4-202ENST00000441080 U3KQ87 197 aa0.89□□□□□ -2.27
PFDN4-202ENST00000441080 CCDC160A6NGH7 325 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 C1orf196B1AJZ1 125 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 SMIM17P0DL12 118 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 PPIBP23284 216 aaKnown RBP0.88□□□□□ -2.27
PFDN4-202ENST00000441080 EDDM3AQ14507 147 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 WFDC5Q8TCV5 224 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 C4orf3Q8WVX3 66 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 HIST1H2BLQ99880 126 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 C6orf62Q9GZU0 229 aaPredicted RBP0.88□□□□□ -2.27
PFDN4-202ENST00000441080 RNASE7Q9H1E1 156 aaKnown RBP0.88□□□□□ -2.27
PFDN4-202ENST00000441080 CDC42SE1Q9NRR8 79 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 UQCC1Q9NVA1 299 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 PRELID3BQ9Y3B1 194 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 HECW1Q76N89 1606 aa0.88□□□□□ -2.27
PFDN4-202ENST00000441080 SMIM9A6NGZ8 99 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 RHOBP62745 196 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 RANP62826 216 aaKnown RBP0.87□□□□□ -2.27
PFDN4-202ENST00000441080 TSNQ15631 228 aaKnown RBP0.87□□□□□ -2.27
PFDN4-202ENST00000441080 ESRGQ1W209 222 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 SOSTDC1Q6X4U4 206 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 LCA10Q71F78 164 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 CLECL1Q8IZS7 167 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 TEX47Q8TBZ9 253 aa0.87□□□□□ -2.27
PFDN4-202ENST00000441080 ZNF736B4DX44 427 aaPredicted RBP0.86□□□□□ -2.27
PFDN4-202ENST00000441080 TCRBP04435 133 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 SERPINE1P05121 402 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 C8GP07360 202 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 ZNF25P17030 456 aaPredicted RBP0.86□□□□□ -2.27
PFDN4-202ENST00000441080 ANP32AP39687 249 aaKnown RBP0.86□□□□□ -2.27
PFDN4-202ENST00000441080 AP3S2P59780 193 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 LSM6P62312 80 aaKnown RBP0.86□□□□□ -2.27
PFDN4-202ENST00000441080 HIST1H3AP68431 136 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 H3F3AP84243 136 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 MPV17LQ2QL34 196 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 LINC00301Q8NCQ3 95 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 SLC25A40Q8TBP6 338 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 PPP1R14BQ96C90 147 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 TVP23BQ9NYZ1 205 aa0.86□□□□□ -2.27
PFDN4-202ENST00000441080 EML6Q6ZMW3 1958 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 J3QRK9 145 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 PDE6DO43924 150 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 ADGRB2O60241 1585 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 Q6Q795 121 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 OR2T10Q8NGZ9 312 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 BORCS5Q969J3 196 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 ADAT3Q96EY9 351 aaPredicted RBP0.85□□□□□ -2.27
PFDN4-202ENST00000441080 AMELYQ99218 206 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 UBAP1Q9NZ09 502 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 FBXO5Q9UKT4 447 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 LAMB4A4D0S4 1761 aa0.85□□□□□ -2.27
PFDN4-202ENST00000441080 CYB5BO43169 146 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 DEFA3P59666 94 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 RGS21Q2M5E4 152 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 OR51A2Q8NGJ7 313 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 FAM172AQ8WUF8 416 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 ITFG2Q969R8 447 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 BCL2L10Q9HD36 194 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 C14orf132Q9NPU4 83 aa0.84□□□□□ -2.27
PFDN4-202ENST00000441080 MYO3BQ8WXR4 1341 aa0.84□□□□□ -2.28
PFDN4-202ENST00000441080 SRSF6Q13247 344 aaKnown RBP0.83□□□□□ -2.28
PFDN4-202ENST00000441080 TMEM97Q5BJF2 176 aa0.83□□□□□ -2.28
PFDN4-202ENST00000441080 IDI2-AS1Q9NZ38 188 aa0.83□□□□□ -2.28
PFDN4-202ENST00000441080 GLTPQ9NZD2 209 aa0.83□□□□□ -2.28
PFDN4-202ENST00000441080 PLB1Q6P1J6 1458 aa0.83□□□□□ -2.28
PFDN4-202ENST00000441080 MED1Q15648 1581 aaPredicted RBP0.83□□□□□ -2.28
PFDN4-202ENST00000441080 EIF5AP63241 154 aaKnown RBP0.82□□□□□ -2.28
PFDN4-202ENST00000441080 SLAMF6Q96DU3 332 aa0.82□□□□□ -2.28
PFDN4-202ENST00000441080 RNF122Q9H9V4 155 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms