RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MALRD1Q5VYJ5 2156 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 IGKV1D-37A0A075B6S9 117 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 A0A1W2PPI3 338 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 CORTO00230 105 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 USF1P22415 310 aaPredicted RBP10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 GPR6P46095 362 aaPredicted RBP10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 PAFAH1B2P68402 229 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 PRR30Q53SZ7 412 aaPredicted RBP10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 NUP37Q8NFH4 326 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 OSTCQ9NRP0 149 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 ZNF318Q5VUA4 2279 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 BMPR1BO00238 502 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 TOX4O94842 621 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 CAMPP49913 170 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 SLAQ13239 276 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 TMEM177Q53S58 311 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 LRRC10Q5BKY1 277 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 IGFBPL1Q8WX77 278 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 CDC42EP3Q9UKI2 254 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 IGLV2-23P01705 113 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 MFAP2P55001 183 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 C3orf36Q3SXR2 165 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 CACNG8Q8WXS5 425 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 DYNLRB1Q9NP97 96 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 KIR2DL5BA0A0G2JN68 375 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 KIR2DL5BA0A0G2JPC4 375 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 GPX1P07203 203 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 NUTF2P61970 127 aaKnown RBP10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 KIR2DL5AQ8N109 375 aa10.91□□□□□ -0.66
HERPUD1-204ENST00000439977 TRAV9-1A0A075B6T8 112 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 A0A1W2PS18 150 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 C22orf46C9J442 243 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 M0R143 59 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 CD24P25063 80 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 LOXP28300 417 aaPredicted RBP10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 BRS3P32247 399 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 SSTP61278 116 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 MEF2CQ06413 473 aaPredicted RBP10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 ZNF329Q86UD4 541 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 ATOH7Q8N100 152 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 TMEM167AQ8TBQ9 72 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 TMEM68Q96MH6 324 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 NRN1Q9NPD7 142 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 WASHC3Q9Y3C0 194 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 MUC6Q6W4X9 2439 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 A6NNC1 897 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 Q0VG73 95 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 TNXAQ16473 311 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 GFRALQ6UXV0 394 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 C19orf24Q9BVV8 132 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 SSUH2Q9Y2M2 353 aa10.9□□□□□ -0.66
HERPUD1-204ENST00000439977 CUL9Q8IWT3 2517 aa10.9□□□□□ -0.67
HERPUD1-204ENST00000439977 TCRBV4S1A1TA0A5B7 111 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 APCSP02743 223 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 COMPP49747 757 aaPredicted RBP10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 WNT10AQ9GZT5 417 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 ZNF331Q9NQX6 463 aaPredicted RBP10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 TNFRSF19Q9NS68 423 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 A0A1W2PN81 502 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 SMIM27A0A1W2PRY6 76 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 PEX7O00628 323 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 AMY1AP04745 511 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 GDF5OSQ5U4N7 250 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 ZNF841Q6ZN19 808 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 PRSS33Q8NF86 280 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 RNASE6Q93091 150 aaKnown RBP10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 ST6GALNAC6Q969X2 333 aa10.89□□□□□ -0.67
HERPUD1-204ENST00000439977 PGPA6NDG6 321 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 FAM87AP0C7U9 286 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 LBHQ53QV2 105 aaPredicted RBP10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 VSTM2AQ8TAG5 236 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 TMEM186Q96B77 213 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 MRPL32Q9BYC8 188 aaKnown RBP10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 SUB1P53999 127 aaKnown RBP eCLIP10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 CYB5R2Q6BCY4 276 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 NUP35Q8NFH5 326 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 ARL2-SNX15V9GYD0 113 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 IGHV1-8P0DP01 117 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 ESDP10768 282 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 COX7A1P24310 79 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 TEX43Q6ZNM6 134 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 PNKDQ8N490 385 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 ASCL2Q99929 193 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 ZNF586Q9NXT0 402 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 MED13LQ71F56 2210 aa10.88□□□□□ -0.67
HERPUD1-204ENST00000439977 HIGD1CA8MV81 97 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 E7EQL1 145 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 BPIFB3P59826 476 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 TMEM183BQ1AE95 376 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 MRGPRG-AS1Q2M3A8 158 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms