RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TCF24Q7RTU0 167 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 ST8SIA2Q92186 375 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 ACY3Q96HD9 319 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 RETNQ9HD89 108 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 FAM90A26D6RGX4 464 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 MED6O75586 246 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 APOHP02749 345 aaPredicted RBP17.91■□□□□ 0.46
CPNE1-217ENST00000439669 OR4E1P0C645 316 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 DHRS2Q13268 280 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 C4orf46Q504U0 113 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 LYG2Q86SG7 212 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 COQ8AQ8NI60 647 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 NPIPB3Q92617 1050 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 METTL26Q96S19 204 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 GGTLC1Q9BX51 225 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 TMEM231Q9H6L2 316 aa17.91■□□□□ 0.46
CPNE1-217ENST00000439669 HUWE1Q7Z6Z7 4374 aaKnown RBP17.9■□□□□ 0.46
CPNE1-217ENST00000439669 NPPCP23582 126 aa17.9■□□□□ 0.46
CPNE1-217ENST00000439669 ATP5IP56385 69 aaPredicted RBP17.9■□□□□ 0.46
CPNE1-217ENST00000439669 GBGT1Q8N5D6 347 aa17.9■□□□□ 0.46
CPNE1-217ENST00000439669 VSIRQ9H7M9 311 aa17.9■□□□□ 0.46
CPNE1-217ENST00000439669 PAIP2BQ9ULR5 123 aaKnown RBP17.9■□□□□ 0.46
CPNE1-217ENST00000439669 LOC102724200A0A096LPH7 203 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-217ENST00000439669 LYRM1O43325 122 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 ADAP1O75689 374 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 ODF3L2Q3SX64 289 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 FAM90A2PQ658T7 463 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 Q8WTZ3 238 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 CITED4Q96RK1 184 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 MAGT1Q9H0U3 335 aa17.89■□□□□ 0.45
CPNE1-217ENST00000439669 PLA2G10O15496 165 aa17.88■□□□□ 0.45
CPNE1-217ENST00000439669 CD5P06127 495 aa17.88■□□□□ 0.45
CPNE1-217ENST00000439669 YPEL3P61236 119 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-217ENST00000439669 RAB11AP62491 216 aa17.88■□□□□ 0.45
CPNE1-217ENST00000439669 RPL11P62913 178 aaKnown RBP17.88■□□□□ 0.45
CPNE1-217ENST00000439669 PAFAH1B2P68402 229 aa17.88■□□□□ 0.45
CPNE1-217ENST00000439669 NARS2Q96I59 477 aaKnown RBP17.88■□□□□ 0.45
CPNE1-217ENST00000439669 CIB3Q96Q77 187 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-217ENST00000439669 FAM110AQ9BQ89 295 aa17.88■□□□□ 0.45
CPNE1-217ENST00000439669 CCDC32Q9BV29 185 aa17.88■□□□□ 0.45
CPNE1-217ENST00000439669 STAB2Q8WWQ8 2551 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 A0A1W2PS18 150 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 DFFBO76075 338 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 IFNA21P01568 189 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 CNPY1Q3B7I2 92 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 LILRB2Q8N423 598 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 SLC35E1Q96K37 410 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 C20orf85Q9H1P6 137 aa17.87■□□□□ 0.45
CPNE1-217ENST00000439669 WRBO00258 174 aa17.86■□□□□ 0.45
CPNE1-217ENST00000439669 SYNGR2O43760 224 aa17.86■□□□□ 0.45
CPNE1-217ENST00000439669 WFDC3Q8IUB2 231 aa17.86■□□□□ 0.45
CPNE1-217ENST00000439669 MUC7Q8TAX7 377 aa17.86■□□□□ 0.45
CPNE1-217ENST00000439669 MPTX1A8MV57 137 aa17.85■□□□□ 0.45
CPNE1-217ENST00000439669 DNASE2O00115 360 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-217ENST00000439669 CRYBB3P26998 211 aa17.85■□□□□ 0.45
CPNE1-217ENST00000439669 GPX4P36969 197 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-217ENST00000439669 RPP30P78346 268 aaKnown RBP17.85■□□□□ 0.45
CPNE1-217ENST00000439669 LINC00299Q6ZSB3 139 aa17.85■□□□□ 0.45
CPNE1-217ENST00000439669 A6NHS1 94 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 C3orf84H3BNL1 204 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 TOMM40O96008 361 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 IL4P05112 153 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 RD3LP0DJH9 198 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 P2RY1P47900 373 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 CMC4P56277 68 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-217ENST00000439669 S100ZQ8WXG8 99 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 GRAMD2BQ96HH9 432 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 MS4A6AQ9H2W1 248 aa17.84■□□□□ 0.45
CPNE1-217ENST00000439669 ZFP92A6NM28 416 aa17.83■□□□□ 0.44
CPNE1-217ENST00000439669 HNRNPCP07910 306 aaKnown RBP eCLIP17.83■□□□□ 0.448e-7■■■□□ 18.2
CPNE1-217ENST00000439669 GAMTQ14353 236 aa17.83■□□□□ 0.44
CPNE1-217ENST00000439669 APRG1Q8IVJ8 170 aa17.83■□□□□ 0.44
CPNE1-217ENST00000439669 EDA2RQ9HAV5 297 aa17.83■□□□□ 0.44
CPNE1-217ENST00000439669 RABAC1Q9UI14 185 aa17.83■□□□□ 0.44
CPNE1-217ENST00000439669 TENM3Q9P273 2699 aa17.83■□□□□ 0.44
CPNE1-217ENST00000439669 TRAV6A0A075B6T7 132 aa17.82■□□□□ 0.44
CPNE1-217ENST00000439669 TCRBP04435 133 aa17.82■□□□□ 0.44
CPNE1-217ENST00000439669 APOC4P55056 127 aa17.82■□□□□ 0.44
CPNE1-217ENST00000439669 USF2Q15853 346 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-217ENST00000439669 SPANXN5Q5MJ07 72 aa17.82■□□□□ 0.44
CPNE1-217ENST00000439669 MAP6D1Q9H9H5 199 aa17.82■□□□□ 0.44
CPNE1-217ENST00000439669 H3BP45 60 aa17.81■□□□□ 0.44
CPNE1-217ENST00000439669 PSG1P11464 419 aa17.81■□□□□ 0.44
CPNE1-217ENST00000439669 RPL35AP18077 110 aaKnown RBP17.81■□□□□ 0.44
CPNE1-217ENST00000439669 NKX2-1P43699 371 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-217ENST00000439669 POLR2GP62487 172 aaKnown RBP eCLIP17.81■□□□□ 0.44
CPNE1-217ENST00000439669 STXBP6Q8NFX7 210 aa17.81■□□□□ 0.44
CPNE1-217ENST00000439669 MITD1Q8WV92 249 aa17.81■□□□□ 0.44
CPNE1-217ENST00000439669 NUDT15Q9NV35 164 aa17.81■□□□□ 0.44
CPNE1-217ENST00000439669 ID3Q02535 119 aa17.8■□□□□ 0.44
CPNE1-217ENST00000439669 ZNF124Q15973 351 aa17.8■□□□□ 0.44
CPNE1-217ENST00000439669 OR51G1Q8NGK1 321 aa17.8■□□□□ 0.44
CPNE1-217ENST00000439669 OR4D5Q8NGN0 318 aa17.8■□□□□ 0.44
CPNE1-217ENST00000439669 STRAPQ9Y3F4 350 aaKnown RBP17.8■□□□□ 0.44
CPNE1-217ENST00000439669 TRAV2A0A0B4J234 112 aa17.79■□□□□ 0.44
CPNE1-217ENST00000439669 SCGB1D2O95969 90 aa17.79■□□□□ 0.44
CPNE1-217ENST00000439669 EIF2B2P49770 351 aaKnown RBP17.79■□□□□ 0.44
CPNE1-217ENST00000439669 IAH1Q2TAA2 248 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-217ENST00000439669 PBDC1Q9BVG4 233 aa17.79■□□□□ 0.44
CPNE1-217ENST00000439669 PTTG2Q9NZH5 202 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms