RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PHYHO14832 338 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NUPL2O15504 423 aaKnown RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SOCS1O15524 211 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CHST10O43529 356 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CHP2O43745 196 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ENTPD6O75354 484 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 UPK1BO75841 260 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 KCNK2O95069 426 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 TCRBP04435 133 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 HLA-DPB1P04440 258 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ADRA2AP08913 450 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR4A8P0C604 315 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 GKN3PP0CG01 181 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 PGA5P0DJD9 388 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGHV3-43DP0DP04 118 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CCL3P10147 92 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CD37P11049 281 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC2A1P11166 492 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 LGALS3P17931 250 aaKnown RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 M6PRP20645 277 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CFL1P23528 166 aaKnown RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 DTYMKP23919 212 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 F2RP25116 425 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 PSMA1P25786 263 aaKnown RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 MAP2K4P45985 399 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NMUP48645 174 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 UBE2AP49459 152 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 GNG10P50151 68 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NCBP2P52298 156 aaKnown RBP eCLIP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 DLX6P56179 175 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 FXYD6P3P58550 94 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 TAS2R41P59536 307 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 TAS2R31P59538 309 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 PPP1CBP62140 327 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 PAFAH1B2P68402 229 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 S100A12P80511 92 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 MXD1Q05195 221 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 BAXQ07812 192 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ECH1Q13011 328 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 KRR1Q13601 381 aaKnown RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CLINT1Q14677 625 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF846Q147U1 533 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 QPRTQ15274 297 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR1Q1Q15612 314 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAM1Q15629 374 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 MAPK14Q16539 360 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF404Q494X3 552 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CDNFQ49AH0 187 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 DEFB134Q4QY38 66 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CCDC58Q4VC31 144 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRMT12Q53H54 448 aaKnown RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR10J3Q5JRS4 329 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NXNL2Q5VZ03 156 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 HBMQ6B0K9 141 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 C5orf46Q6UWT4 87 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CASP12Q6UXS9 341 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NPSR1Q6W5P4 371 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 GALNT10Q86SR1 603 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CALHM1Q8IU99 346 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 STX19Q8N4C7 294 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ACBD7Q8N6N7 88 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 PLPP5Q8NEB5 264 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR8G5Q8NG78 346 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR8D4Q8NGM9 314 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR9A2Q8NGT5 310 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR52N1Q8NH53 320 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2AE1Q8NHA4 323 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 AP3S1Q92572 193 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 RERGQ96A58 199 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZHX1-C8orf76Q96EF9 292 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 UBE2E2Q96LR5 201 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 KCTD7Q96MP8 289 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SCGB3A2Q96PL1 93 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 RBP7Q96R05 134 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 GPX7Q96SL4 187 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 RARRES2Q99969 163 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NIPSNAP1Q9BPW8 284 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 WFDC6Q9BQY6 131 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC22A4Q9H015 551 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 DCSTAMPQ9H295 470 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 IFI27L2Q9H2X8 130 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR51B6Q9H340 312 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF442Q9H7R0 627 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 RHOFQ9HBH0 211 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 TMEM27Q9HBJ8 222 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 HMG20AQ9NP66 347 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC2A9Q9NRM0 540 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 CMC2Q9NRP2 79 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 UBQLN4Q9NRR5 601 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 NDUFB11Q9NX14 153 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SIGLEC7Q9Y286 467 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF443Q9Y2A4 671 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC35A3Q9Y2D2 325 aa1.29□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGLV3-32A0A0A0MS00 114 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 NBDYA0A0U1RRE5 68 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 LOC102725191A0A1B0GVB3 256 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A1B0GVG6 124 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A1B0GWA3 101 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 FUOMA2VDF0 154 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms