RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 STXBP6Q8NFX7 210 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 LINC00479Q96M42 142 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 NAV3Q8IVL0 2385 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 F2Z2F3 143 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 ENSAO43768 121 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 AMY1AP04745 511 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 CD3EP07766 207 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 MGST1P10620 155 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 COMPP49747 757 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 NAT8BQ9UHF3 227 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 SIGLEC9Q9Y336 463 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 ACACAQ13085 2346 aa12.88□□□□□ -0.35
HLA-DQB2-231ENST00000435145 IZUMO1RA6ND01 250 aa12.87□□□□□ -0.35
HLA-DQB2-231ENST00000435145 RBP4P02753 201 aa12.87□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PRRX1P54821 245 aa12.87□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PERPQ96FX8 193 aa12.87□□□□□ -0.35
HLA-DQB2-231ENST00000435145 C7orf69Q9H7B7 122 aa12.87□□□□□ -0.35
HLA-DQB2-231ENST00000435145 GNB4Q9HAV0 340 aa12.87□□□□□ -0.35
HLA-DQB2-231ENST00000435145 IGHV1-3A0A0C4DH29 117 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 HLA-DQA1P01909 254 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 CNTFRP26992 372 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PLP1P60201 277 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 OR10J3Q5JRS4 329 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 HCP5Q6MZN7 132 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 WIPF2Q8TF74 440 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 BUB1B-PAK6H3BSN5 160 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PLAUP00749 431 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TCL1AP56279 114 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 RASL11AQ6T310 242 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 BAGE3Q86Y29 109 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 CLEC7AQ9BXN2 247 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
HLA-DQB2-231ENST00000435145 BSNQ9UPA5 3926 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 LAMA5O15230 3695 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 APC2O95996 2303 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TEX22C9J3V5 150 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 CORTO00230 105 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 MOSP00540 346 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TNXAQ16473 311 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TPTE2P1Q5T6R2 138 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 C8orf46Q8TAG6 207 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 FAM168AQ92567 244 aa12.85□□□□□ -0.35
HLA-DQB2-231ENST00000435145 BMPR1BO00238 502 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 SPINK4O60575 86 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 SLC35B1P78383 322 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 FBXL19-AS1Q494R0 122 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PCNX1Q96RV3 2341 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 HSPB9Q9BQS6 159 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 EPDR1Q9UM22 224 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 F11RQ9Y624 299 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 LY6LH3BQJ8 138 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 DLX1P56177 255 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 ZNF600Q6ZNG1 722 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 C19orf35Q6ZS72 473 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 PPP1R27Q86WC6 154 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 C22orf15Q8WYQ4 148 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 GRAMD2BQ96HH9 432 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 TBX15Q96SF7 602 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
HLA-DQB2-231ENST00000435145 ATMQ13315 3056 aa12.83□□□□□ -0.35
HLA-DQB2-231ENST00000435145 A0A1B0GV90 55 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 CA1P00915 261 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 GP9P14770 177 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 ORM2P19652 201 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 BRS3P32247 399 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 MRPL54Q6P161 138 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 NUDT10Q8NFP7 164 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 NUDT11Q96G61 164 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 LYNX1G3V0Z9 82 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 HYPMO75409 117 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 GPX1P07203 203 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 LYNX1P0DP58 116 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 CD33P20138 364 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 RNF5Q99942 180 aa12.83□□□□□ -0.36
HLA-DQB2-231ENST00000435145 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 SIAH2O43255 324 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 GNG5P63218 68 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 KIAA1644Q3SXP7 199 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 CHRDL1Q9BU40 450 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 MLST8Q9BVC4 326 aa12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB2-231ENST00000435145 PPIAL4CA0A0B4J2A2 164 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms