RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 NPY1RP25929 384 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 P2RY1P47900 373 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 PMS2P11Q13670 270 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 METTL26Q96S19 204 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 RBM38Q9H0Z9 239 aaKnown RBP11.55□□□□□ -0.56
NUP50-210ENST00000434760 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
NUP50-210ENST00000434760 MCUBQ9NWR8 336 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 SHPKQ9UHJ6 478 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 U3KQE9 123 aa11.55□□□□□ -0.56
NUP50-210ENST00000434760 FABP12A6NFH5 140 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 K7EQG2 157 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 SLC25A4P12235 298 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 NPPCP23582 126 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 CMC4P56277 68 aaPredicted RBP11.54□□□□□ -0.56
NUP50-210ENST00000434760 DEFB131AP59861 70 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 LEMD1Q68G75 181 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 OR1S2Q8NGQ3 325 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 DCANP1Q8TF63 244 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 LINC00476Q8WZB0 136 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 TMEM231Q9H6L2 316 aa11.54□□□□□ -0.56
NUP50-210ENST00000434760 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 NUPR2A6NF83 97 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 OR10J1P30954 320 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 SMCO1Q147U7 214 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 RBMS2Q15434 407 aaKnown RBP11.53□□□□□ -0.56
NUP50-210ENST00000434760 USF2Q15853 346 aaPredicted RBP11.53□□□□□ -0.56
NUP50-210ENST00000434760 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 GATAD1Q8WUU5 269 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
NUP50-210ENST00000434760 C11orf68Q9H3H3 251 aaKnown RBP11.53□□□□□ -0.56
NUP50-210ENST00000434760 CXorf65A6NEN9 183 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 MPTX1A8MV57 137 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 AKR1C4P17516 323 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 CCR6P51684 374 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 YPEL3P61236 119 aaPredicted RBP11.52□□□□□ -0.57
NUP50-210ENST00000434760 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 SCGB3A2Q96PL1 93 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 CACFD1Q9UGQ2 172 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 RABAC1Q9UI14 185 aa11.52□□□□□ -0.57
NUP50-210ENST00000434760 A0A1W2PS18 150 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 DNASE2O00115 360 aaPredicted RBP11.51□□□□□ -0.57
NUP50-210ENST00000434760 CA1P00915 261 aaPredicted RBP11.51□□□□□ -0.57
NUP50-210ENST00000434760 GIG44P09565 113 aaPredicted RBP11.51□□□□□ -0.57
NUP50-210ENST00000434760 SRPXP78539 464 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
NUP50-210ENST00000434760 CCDC190Q86UF4 302 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 LGI3Q8N145 548 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 STXBP6Q8NFX7 210 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 RBKSQ9H477 322 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 KCNIP3Q9Y2W7 256 aa11.51□□□□□ -0.57
NUP50-210ENST00000434760 PITX3O75364 302 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 TOMM40O96008 361 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP50-210ENST00000434760 ZNF688P0C7X2 276 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 C4BPBP20851 252 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
NUP50-210ENST00000434760 RPL11P62913 178 aaKnown RBP11.5□□□□□ -0.57
NUP50-210ENST00000434760 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
NUP50-210ENST00000434760 C16orf54Q6UWD8 224 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 NPIPB3Q92617 1050 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 U3KQ87 197 aa11.5□□□□□ -0.57
NUP50-210ENST00000434760 DUXBA0A1W2PPF3 345 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 IL4P05112 153 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 PYDC2Q56P42 97 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 TMED4Q7Z7H5 227 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 TMEM217Q8N7C4 229 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 ACY3Q96HD9 319 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 RARRES2Q99969 163 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 DNAH10Q8IVF4 4471 aa11.49□□□□□ -0.57
NUP50-210ENST00000434760 IGKV1D-37A0A075B6S9 117 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 IFNA10P01566 189 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 ANXA3P12429 323 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 AP3S2P59780 193 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 TMEM128Q5BJH2 165 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 NOXA1Q86UR1 476 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 TOMM5Q8N4H5 51 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 Q8NAQ8 132 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 OR11H2Q8NH07 326 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 Q8WTZ3 238 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 DEDD2Q8WXF8 326 aa11.48□□□□□ -0.57
NUP50-210ENST00000434760 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
NUP50-210ENST00000434760 KNCNA6PVL3 124 aa11.47□□□□□ -0.57
NUP50-210ENST00000434760 BUB3O43684 328 aa11.47□□□□□ -0.57
NUP50-210ENST00000434760 PSG1P11464 419 aa11.47□□□□□ -0.57
NUP50-210ENST00000434760 PPP1R1AQ13522 171 aa11.47□□□□□ -0.57
NUP50-210ENST00000434760 STHQ8IWL8 128 aa11.47□□□□□ -0.57
NUP50-210ENST00000434760 SRRQ9GZT4 340 aa11.47□□□□□ -0.57
NUP50-210ENST00000434760 HELTA6NFD8 242 aa11.46□□□□□ -0.57
NUP50-210ENST00000434760 FAM90A26D6RGX4 464 aa11.46□□□□□ -0.57
NUP50-210ENST00000434760 SLC25A6P12236 298 aa11.46□□□□□ -0.57
NUP50-210ENST00000434760 OR1S1Q8NH92 325 aa11.46□□□□□ -0.57
NUP50-210ENST00000434760 PHLDA1Q8WV24 401 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms