RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 POLR2GP62487 172 aaKnown RBP eCLIP13.83□□□□□ -0.2
HLA-F-220ENST00000434407 BTNL8Q6UX41 500 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 SLC16A13Q7RTY0 426 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 TMEM61Q8N0U2 210 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 OR1S2Q8NGQ3 325 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 B9D2Q9BPU9 175 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 MARVELD1Q9BSK0 173 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 SMPXQ9UHP9 88 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 PUS1Q9Y606 427 aaKnown RBP eCLIP13.83□□□□□ -0.2
HLA-F-220ENST00000434407 SMAD5-AS1Q9Y6J3 95 aa13.83□□□□□ -0.2
HLA-F-220ENST00000434407 PRSS46E5RG02 174 aa13.82□□□□□ -0.2
HLA-F-220ENST00000434407 SCGB2A1O75556 95 aa13.82□□□□□ -0.2
HLA-F-220ENST00000434407 YIF1AO95070 293 aa13.82□□□□□ -0.2
HLA-F-220ENST00000434407 OR10J1P30954 320 aa13.82□□□□□ -0.2
HLA-F-220ENST00000434407 YPEL3P61236 119 aaPredicted RBP13.82□□□□□ -0.2
HLA-F-220ENST00000434407 RAB11AP62491 216 aa13.82□□□□□ -0.2
HLA-F-220ENST00000434407 RPP30P78346 268 aaKnown RBP13.82□□□□□ -0.2
HLA-F-220ENST00000434407 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
HLA-F-220ENST00000434407 IGHV7-4-1A0A0J9YVY3 117 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 INMT-MINDY4F8WBC2 141 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 CCSO14618 274 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
HLA-F-220ENST00000434407 PRAF2O60831 178 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
HLA-F-220ENST00000434407 PAX9P55771 341 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 GAMTQ14353 236 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 TIGITQ495A1 244 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 WDR89Q96FK6 387 aaPredicted RBP13.81□□□□□ -0.2
HLA-F-220ENST00000434407 SMIM8Q96KF7 97 aa13.81□□□□□ -0.2
HLA-F-220ENST00000434407 hCG_2014768A0A024R1R8 64 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 TRAV14DV4A0A0A6YYC5 116 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 SNRPGP15A8MWD9 76 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 A8MZ25 164 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 CHEK1O14757 476 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 MBPP02686 304 aaPredicted RBP13.8□□□□□ -0.2
HLA-F-220ENST00000434407 IL15RAQ13261 267 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 SPANXN5Q5MJ07 72 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 GINS3Q9BRX5 216 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 GSKIPQ9P0R6 139 aa13.8□□□□□ -0.2
HLA-F-220ENST00000434407 RCL1Q9Y2P8 373 aaKnown RBP13.8□□□□□ -0.2
HLA-F-220ENST00000434407 STRAPQ9Y3F4 350 aaKnown RBP13.8□□□□□ -0.2
HLA-F-220ENST00000434407 SSSCA1O60232 199 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 TAS2R30P59541 319 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 ACY3Q96HD9 319 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 C2orf50Q96LR7 162 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 RAB40CQ96S21 281 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 RHPN1-AS1Q9BWJ2 59 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 VSIRQ9H7M9 311 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 GPN1Q9HCN4 374 aaPredicted RBP13.79□□□□□ -0.2
HLA-F-220ENST00000434407 PSENENQ9NZ42 101 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 SELENOKQ9Y6D0 94 aa13.79□□□□□ -0.2
HLA-F-220ENST00000434407 IGKV1D-37A0A075B6S9 117 aa13.78□□□□□ -0.2
HLA-F-220ENST00000434407 PMS2P5A8MQ11 134 aa13.78□□□□□ -0.2
HLA-F-220ENST00000434407 TSPAN4O14817 238 aa13.78□□□□□ -0.2
HLA-F-220ENST00000434407 GTSCR1Q86UQ5 136 aa13.78□□□□□ -0.2
HLA-F-220ENST00000434407 SLC35E1Q96K37 410 aa13.78□□□□□ -0.2
HLA-F-220ENST00000434407 C19orf73Q9NVV2 129 aa13.78□□□□□ -0.2
HLA-F-220ENST00000434407 C5orf51A6NDU8 294 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 H3BP45 60 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 TOMM40O96008 361 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 IGHV4-30-4P0DP06 118 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 CRYBB3P26998 211 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 GUCA2BQ16661 112 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 TMEM14EPQ6UXP3 125 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 RBPMS2Q6ZRY4 209 aaKnown RBP13.77□□□□□ -0.21
HLA-F-220ENST00000434407 RNF2Q99496 336 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 SPAG8Q99932 426 aaPredicted RBP13.77□□□□□ -0.21
HLA-F-220ENST00000434407 C11orf1Q9H5F2 150 aa13.77□□□□□ -0.21
HLA-F-220ENST00000434407 PAIP2BQ9ULR5 123 aaKnown RBP13.77□□□□□ -0.21
HLA-F-220ENST00000434407 C7orf66A4D0T2 115 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 FAM25EA8MYX2 175 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 TSC22D2O75157 780 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 SCGB1D2O95969 90 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 CD7P09564 240 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 CD81P60033 236 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 LAMTOR1Q6IAA8 161 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 GSG1LQ6UXU4 331 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 THAP8Q8NA92 274 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 Q8WTZ3 238 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 NEURL2Q9BR09 285 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 U3KQE9 123 aa13.76□□□□□ -0.21
HLA-F-220ENST00000434407 IGKV1OR2-108A0A075B7D4 117 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 IGHV3-49A0A0A0MS15 119 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 K7EPK0 472 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 APOHP02749 345 aaPredicted RBP13.75□□□□□ -0.21
HLA-F-220ENST00000434407 FRMD6-AS1P0C7T7 363 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 RD3LP0DJH9 198 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 NPPCP23582 126 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 BMI1P35226 326 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 LILRB2Q8N423 598 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 ST8SIA2Q92186 375 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 METTL26Q96S19 204 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 TRGV9Q99603 122 aa13.75□□□□□ -0.21
HLA-F-220ENST00000434407 STAB2Q8WWQ8 2551 aa13.74□□□□□ -0.21
HLA-F-220ENST00000434407 CD5P06127 495 aa13.74□□□□□ -0.21
HLA-F-220ENST00000434407 PSG1P11464 419 aa13.74□□□□□ -0.21
HLA-F-220ENST00000434407 HUWE1Q7Z6Z7 4374 aaKnown RBP13.74□□□□□ -0.21
HLA-F-220ENST00000434407 IGHV3OR16-13A0A075B7E8 117 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 IGHV3-74A0A0B4J1X5 117 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms