RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 OR2J2O76002 312 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 ATG12O94817 140 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 IFNGP01579 166 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 TSPAN19P0C672 248 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 F5P12259 2224 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 HIST1H1TP22492 207 aaPredicted RBP3.06□□□□□ -1.92
USP54-206ENST00000433394 IFNGR2P38484 337 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 EIF2B2P49770 351 aaKnown RBP3.06□□□□□ -1.92
USP54-206ENST00000433394 ARPP19P56211 112 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 HIST3H3Q16695 136 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 C4orf26Q17RF5 130 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 ACSBG2Q5FVE4 666 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 RNASE10Q5GAN6 216 aaKnown RBP3.06□□□□□ -1.92
USP54-206ENST00000433394 PRRC2BQ5JSZ5 2229 aaKnown RBP3.06□□□□□ -1.92
USP54-206ENST00000433394 C9orf64Q5T6V5 341 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 HIST2H3PS2Q5TEC6 136 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 HES3Q5TGS1 186 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 SAMD13Q5VXD3 122 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 SMARCD3Q6STE5 483 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 ZNF283Q8N7M2 679 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 TMEM75Q8N9X5 138 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 ZNF439Q8NDP4 499 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 OR9Q1Q8NGQ5 310 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 Q8WTZ3 238 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 ACY3Q96HD9 319 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 PPP3R2Q96LZ3 170 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 CCDC32Q9BV29 185 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 ENY2Q9NPA8 101 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 COPZ2Q9P299 210 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 OPTCQ9UBM4 332 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 GNG8Q9UK08 70 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 CARHSP1Q9Y2V2 147 aaKnown RBP3.06□□□□□ -1.92
USP54-206ENST00000433394 UFC1Q9Y3C8 167 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 SHANK1Q9Y566 2161 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 TEX50A0A1B0GTY4 177 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 E7EQL1 145 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 HCRTO43612 131 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 FAM107AO95990 144 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 BPGMP07738 259 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 P0C880 135 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 MYL12AP19105 171 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 PSMD8P48556 350 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 MARCKSL1P49006 195 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 RBP2P50120 134 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 RPL26P61254 145 aaKnown RBP3.05□□□□□ -1.92
USP54-206ENST00000433394 GNG3P63215 75 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 BSPH1Q075Z2 132 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 OR2F1Q13607 317 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 EBPQ15125 230 aaKnown RBP3.05□□□□□ -1.92
USP54-206ENST00000433394 PDGFRLQ15198 375 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 TNFAIP8L3Q5GJ75 292 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 NCBP2-AS2Q69YL0 99 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 TNFAIP8L2Q6P589 184 aaPredicted RBP3.05□□□□□ -1.92
USP54-206ENST00000433394 BRD3OSQ6XYD6 125 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 RASSF6Q6ZTQ3 369 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 TCF24Q7RTU0 167 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 LYPD6Q86Y78 171 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 CTAGE3PQ8IX95 158 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 LRRC25Q8N386 305 aaPredicted RBP3.05□□□□□ -1.92
USP54-206ENST00000433394 SMIM20Q8N5G0 67 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 Q8NAQ8 132 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 OR4K15Q8NH41 348 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 MCFD2Q8NI22 146 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 GPER1Q99527 375 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 PDCD10Q9BUL8 212 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 SPANXCQ9NY87 97 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 COA4Q9NYJ1 87 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 DOK5Q9P104 306 aa3.05□□□□□ -1.92
USP54-206ENST00000433394 RPL26L1Q9UNX3 145 aaKnown RBP3.05□□□□□ -1.92
USP54-206ENST00000433394 TGIF2-C20orf24A0A0A6YYL0 155 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 EVPLLA8MZ36 301 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 ZNF878C9JN71 531 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 TRAPPC2LH3BP13 241 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 CYB5BO43169 146 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 DEDDO75618 318 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 CDK2P24941 298 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 RPL12P30050 165 aaKnown RBP3.04□□□□□ -1.92
USP54-206ENST00000433394 GZMMP51124 257 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 CKS1BP61024 79 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 HPCAP84074 193 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 SPATA31B1PQ5VZV4 182 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 ATP5L2Q7Z4Y8 100 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 FAM19A5Q7Z5A7 132 aaPredicted RBP3.04□□□□□ -1.92
USP54-206ENST00000433394 COMMD7Q86VX2 200 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 YIPF7Q8N8F6 280 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 OR4K13Q8NH42 304 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 OR10D3Q8NH80 312 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 MUC7Q8TAX7 377 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 ASB13Q8WXK3 278 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 TBX5Q99593 518 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 MGLLQ99685 303 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 GGACTQ9BVM4 153 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 PRO3102Q9H379 93 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 SLC35A3Q9Y2D2 325 aa3.04□□□□□ -1.92
USP54-206ENST00000433394 TNRC18O15417 2968 aaPredicted RBP3.04□□□□□ -1.92
USP54-206ENST00000433394 IGKV1-12A0A0C4DH73 117 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 IGSF23A1L1A6 192 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms