RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 H0YJW9 148 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 CDKN1AP38936 164 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 DAZAP1Q96EP5 407 aaKnown RBP9.29□□□□□ -0.92
CLDN4-202ENST00000431918 MIEN1Q9BRT3 115 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TMEM133Q9H2Q1 129 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TNFRSF19Q9NS68 423 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 ZNF672Q499Z4 452 aaPredicted RBP9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TMEM144Q7Z5S9 345 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 FAM90A9PA6NNJ1 464 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TMEM238C9JI98 176 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 IGHV1-8P0DP01 117 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TMEM30BQ3MIR4 351 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 LDLRAD2Q5SZI1 272 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
CLDN4-202ENST00000431918 FAM103A1Q9BTL3 118 aaKnown RBP9.29□□□□□ -0.92
CLDN4-202ENST00000431918 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 CTSZQ9UBR2 303 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 FCN1O00602 326 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 C8orf88P0DMB2 117 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
CLDN4-202ENST00000431918 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
CLDN4-202ENST00000431918 PMS2P5A8MQ11 134 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 M0QZ24 198 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 BMI1P35226 326 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 GPR6P46095 362 aaPredicted RBP9.28□□□□□ -0.92
CLDN4-202ENST00000431918 IER3P46695 156 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 HLA-DRB5Q30154 266 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 OR1L4Q8NGR5 311 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 CD69Q07108 199 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 C19orf35Q6ZS72 473 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 RNASEH2CQ8TDP1 164 aaKnown RBP9.28□□□□□ -0.92
CLDN4-202ENST00000431918 RNF2Q99496 336 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 TMEM14BQ9NUH8 114 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 K7ERU9 68 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 PYYP10082 97 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
CLDN4-202ENST00000431918 C3orf36Q3SXR2 165 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 SFRP2Q96HF1 295 aa9.28□□□□□ -0.92
CLDN4-202ENST00000431918 LOXP28300 417 aaPredicted RBP9.27□□□□□ -0.93
CLDN4-202ENST00000431918 KRTDAPP60985 99 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 TEX36Q5VZQ5 186 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 FAM222BQ8WU58 562 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 TPSG1Q9NRR2 321 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 BET1LQ9NYM9 111 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 POLR3KQ9Y2Y1 108 aaPredicted RBP9.27□□□□□ -0.93
CLDN4-202ENST00000431918 LIPFP07098 398 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 HTR1DP28221 377 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 CENPWQ5EE01 88 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 OCC1Q8TAD7 63 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 P0C879 139 aa9.27□□□□□ -0.93
CLDN4-202ENST00000431918 GSX1Q9H4S2 264 aaPredicted RBP9.27□□□□□ -0.93
CLDN4-202ENST00000431918 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
CLDN4-202ENST00000431918 YTHDF2Q9Y5A9 579 aaKnown RBP9.27□□□□□ -0.93
CLDN4-202ENST00000431918 IGHV2-26A0A0B4J1V2 119 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 SHISA9B4DS77 424 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 CD33P20138 364 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 CNTFRP26992 372 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 CEACAM3P40198 252 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 LGALS7P47929 136 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 TCF23Q7RTU1 214 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 ERASQ7Z444 233 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 GBGT1Q8N5D6 347 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 IGHV3-35A0A0C4DH35 117 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 NDUFS8O00217 210 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 CCL25O15444 150 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 KLRD1Q13241 179 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 Q56UQ5 140 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 SLC25A33Q9BSK2 321 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 GNB4Q9HAV0 340 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 GRIFINA4D1Z8 144 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 SNURFLB1AK76 121 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 RNASE2P10153 161 aaKnown RBP9.26□□□□□ -0.93
CLDN4-202ENST00000431918 NTF3P20783 257 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 CA7P43166 264 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 CAMPP49913 170 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 RIPPLY3P57055 190 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 RPEL1Q2QD12 228 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 IMMP2LQ96T52 175 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 RASL11BQ9BPW5 248 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 SSBP3Q9BWW4 388 aaPredicted RBP9.26□□□□□ -0.93
CLDN4-202ENST00000431918 SRD5A3Q9H8P0 318 aa9.26□□□□□ -0.93
CLDN4-202ENST00000431918 LOC105371242A0A075B767 164 aa9.25□□□□□ -0.93
CLDN4-202ENST00000431918 CBLN1P23435 193 aa9.25□□□□□ -0.93
CLDN4-202ENST00000431918 SELENOTP62341 195 aa9.25□□□□□ -0.93
CLDN4-202ENST00000431918 EIF4EBP1Q13541 118 aaPredicted RBP9.25□□□□□ -0.93
CLDN4-202ENST00000431918 LINC01551Q86U37 167 aa9.25□□□□□ -0.93
CLDN4-202ENST00000431918 ZNF257Q9Y2Q1 563 aa9.25□□□□□ -0.93
CLDN4-202ENST00000431918 PGPA6NDG6 321 aa9.25□□□□□ -0.93
CLDN4-202ENST00000431918 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms